Scheffersomyces stipitis: PICST_32232
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Entry
PICST_32232 CDS
T01023
Symbol
FIP1
Name
(RefSeq) component of a pre-mRNA polyadenylation factor
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pic
Scheffersomyces stipitis
Pathway
pic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PICST_32232 (FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_32232 (FIP1)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PICST_32232 (FIP1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Myc_N
Motif
Other DBs
NCBI-GeneID:
4839177
NCBI-ProteinID:
XP_001385203
JGI:
32232
UniProt:
A3LVT0
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Position
5:complement(1002366..1003217)
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AA seq
283 aa
AA seq
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MADHSDDEDAYLYGSDDEAGVKSVGKNESNTKSVSLPNARSEKEVEEVEEEDDDDEEEEE
EDSDDDIDIIIGDSPPKTATVVTSAQTETTASEEKSSTTTIVASQSGEPGTTVDVNTMAE
YEGKPLTQLDLETLKDKPWRAPGADISDYFNYGFDEFTWIAYCHKQDKTRGEFNPQAVMA
KLMGGSAPPMPPAGAGPGGPPGMPPMGMMPPGMPPMGMMPPGMPNMPPGMGMPGMPGMPG
MPNMPNMPNMPNMPNMPNFMNNANNNNSNNGNRQYQNFIPNRQ
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccattcagatgacgaggatgcctatctctatggatccgacgacgaggccggt
gtaaaatctgtaggaaaaaatgaatccaacacgaagagtgtatctttaccaaatgccaga
agtgagaaagaagtagaagaagttgaagaagaagatgatgatgacgaggaagaagaagaa
gaagattctgacgacgatatagatatcataataggtgattcaccacctaaaacggccaca
gtcgttacttctgctcagacagaaactacagcatccgaagaaaagtcatctactacaaca
atagtagccagtcagctgggggagcctggcacaacggtggacgtgaataccatggcagaa
tacgagggaaagccactaacgcaattagacttggaaacacttaaagataagccatggaga
gctcctggagctgatatttccgattacttcaattatggttttgatgaattcacgtggata
gcatattgccacaagcaagacaagacgagaggcgaatttaatcctcaagctgtcatggct
aaattgatgggaggatctgctccacccatgccacctgctggagctggtcctggtggtcct
ccaggtatgcctcctatgggaatgatgccaccgggaatgcctcctatgggtatgatgcct
ccaggcatgcccaatatgccacctggaatgggtatgcctggaatgcctggaatgccaggc
atgcctaacatgcccaacatgcccaacatgcctaatatgcccaacatgcccaatttcatg
aataatgccaataataataatagtaataatggtaataggcaatatcagaatttcattccg
aacaggcaatga
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