Scheffersomyces stipitis: PICST_42907
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Entry
PICST_42907 CDS
T01023
Name
(RefSeq) predicted protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pic
Scheffersomyces stipitis
Pathway
pic04138
Autophagy - yeast
pic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PICST_42907
04148 Efferocytosis
PICST_42907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_42907
Membrane trafficking [BR:
pic04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
PICST_42907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Cor1
Vps39_1
T3RM_EcoP15I_C
Motif
Other DBs
NCBI-GeneID:
4838225
NCBI-ProteinID:
XP_001383818
JGI:
42907
UniProt:
A3LRT6
LinkDB
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Position
3:complement(979900..981807)
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AA seq
636 aa
AA seq
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MSGKVIYSTRSWLGKRSDIVLEQDMGPIVSIQLIDDLVLWMNDKGVTVCHLANRQIICVI
DKPEDSPRSDLYWPRVAFPEIDRIIIGWGNYIWSLRVSLKTEEDGTIASSSMSKILPSTA
SISFRAVQEKKVEIEHIFKLDVLISGISSFKDDLWMVLTYEPPTTDEETGKREYPNPDIK
LINSTNGEVEYEEELGLKNIAGLGLNDFLLGMHIETVPKYFIICARDGVIAEELQLSDRL
AWFLEREKYYEAWEISEHLESPSRRMNFGIQYVDNLIKANNWQQAQEFLNKLLYIDLSDL
HELDSKSIDAIENGVEKVHDKYVKEIIEQWITWSNIFIETGHIRELTEIIPTTAALNIPT
EIYQRILEFWVIEDVTKFHELIEKWDMELYNFKNLQSKLEELLEQQSDNETLRRSLVDLC
IKTDDNIRAVPHLIILKDANIIKFVSENQILSNFIENVPQMIQIRFDGAELNTLPINVLE
KRLADVVDIFVEQRHDFPPHELIHLFKEHHMDFMNYFYLEKLNQVDEFATSQFGNERIKY
YAQYNRSLLLPFLTKHSGYDIARAIELCESNDFTEELVYLLGKIGENRKALMLIINKLED
PIKAIAFAKNQNDREAWNILLDYSMEKPVFIKALIE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcaaagtgatctattcgacaagaagttggttaggaaagagatctgatattgtt
ctagaacaagatatgggtccaatagtgtctattcagcttatagacgatctcgtactttgg
atgaatgacaaaggtgtaaccgtatgccacttagcaaatcgccagatcatctgtgttatc
gataaaccagaagattctcctcgaagtgacctttactggcccagagttgcctttccagag
attgatagaatcataataggctggggtaattacatatggtcgttaagggtatcgttaaaa
acagaagaagacggcactatagcttcatcgtctatgagtaagatcttaccttcgacagct
agcatatcctttagagcagtgcaagaaaaaaaagttgaaattgagcatatcttcaagcta
gatgtgctcatcagtggaatttctagttttaaagatgacctttggatggttctcacctat
gagcctcctactactgatgaggaaacaggaaagagagaatatccaaatccagatataaaa
ttgatcaactctactaatggagaagttgagtatgaagaagagttgggtttaaagaatatt
gctggacttggattgaacgactttttactaggtatgcatatcgaaactgttcccaagtac
tttataatttgtgcgagagatggagtcatagcagaagaactacaattgagtgacagattg
gcatggtttttggaaagggagaagtactacgaagcctgggaaataagtgaacatctagaa
tcgccttcaagacgtatgaattttggaattcagtatgtagacaacttaatcaaagccaac
aactggcaacaggcccaagaattcttgaataagttgttgtatattgatctcagcgattta
catgaactcgattccaagagtatagatgctatcgaaaatggtgttgagaaggtccacgat
aaatacgtcaaagaaatcatagagcaatggattacgtggtccaacatattcatagaaact
ggtcatatcagagaattgacagaaataattccaacaacggcagctctcaatatcccaaca
gagatatatcaacgtattcttgagttctgggttatcgaagacgtcacaaaatttcatgag
ctaattgagaaatgggatatggaactttacaatttcaagaacctacaatcgaagttagaa
gaattgcttgaacagcagtccgacaacgagacattaagacgaagtctagttgacctatgc
ataaagacagacgataatatcagagctgtaccacatttgataatcttgaaagatgccaac
attatcaagtttgtttccgaaaaccaaatactatccaatttcattgaaaatgtaccacaa
atgattcaaataaggtttgatggtgctgaattgaacacattaccaatcaatgtacttgaa
aagaggttggccgacgtagtggatatatttgtggagcagcgacacgatttcccgccccac
gagctaatccatttgtttaaagagcaccatatggatttcatgaactatttctatttggag
aaattgaaccaggtcgacgaatttgcgacgctgcaattcggtaatgagagaatcaaatat
tatgcacaatacaatagaagtctattgcttccattcttgaccaagcatagtggatatgat
attgccagggccatcgaactatgtgaaagtaatgattttacggaggaattggtttaccta
cttggaaaaattggcgaaaacagaaaggctttgatgttgatcatcaacaaactagaagat
ccaataaaagctatagcgtttgcgaagaatcagaacgacagagaagcgtggaatatcttg
cttgactattcaatggaaaagccggtatttataaaagcacttatagag
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