KEGG   Scheffersomyces stipitis: PICST_42907
Entry
PICST_42907       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
pic  Scheffersomyces stipitis
Pathway
pic04138  Autophagy - yeast
pic04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    PICST_42907
   04148 Efferocytosis
    PICST_42907
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pic04131]
    PICST_42907
Membrane trafficking [BR:pic04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    PICST_42907
SSDB
Motif
Pfam: Clathrin Cor1 Vps39_1 T3RM_EcoP15I_C
Other DBs
NCBI-GeneID: 4838225
NCBI-ProteinID: XP_001383818
JGI: 42907
UniProt: A3LRT6
LinkDB
Position
3:complement(979900..981807)
AA seq 636 aa
MSGKVIYSTRSWLGKRSDIVLEQDMGPIVSIQLIDDLVLWMNDKGVTVCHLANRQIICVI
DKPEDSPRSDLYWPRVAFPEIDRIIIGWGNYIWSLRVSLKTEEDGTIASSSMSKILPSTA
SISFRAVQEKKVEIEHIFKLDVLISGISSFKDDLWMVLTYEPPTTDEETGKREYPNPDIK
LINSTNGEVEYEEELGLKNIAGLGLNDFLLGMHIETVPKYFIICARDGVIAEELQLSDRL
AWFLEREKYYEAWEISEHLESPSRRMNFGIQYVDNLIKANNWQQAQEFLNKLLYIDLSDL
HELDSKSIDAIENGVEKVHDKYVKEIIEQWITWSNIFIETGHIRELTEIIPTTAALNIPT
EIYQRILEFWVIEDVTKFHELIEKWDMELYNFKNLQSKLEELLEQQSDNETLRRSLVDLC
IKTDDNIRAVPHLIILKDANIIKFVSENQILSNFIENVPQMIQIRFDGAELNTLPINVLE
KRLADVVDIFVEQRHDFPPHELIHLFKEHHMDFMNYFYLEKLNQVDEFATSQFGNERIKY
YAQYNRSLLLPFLTKHSGYDIARAIELCESNDFTEELVYLLGKIGENRKALMLIINKLED
PIKAIAFAKNQNDREAWNILLDYSMEKPVFIKALIE
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgagtggcaaagtgatctattcgacaagaagttggttaggaaagagatctgatattgtt
ctagaacaagatatgggtccaatagtgtctattcagcttatagacgatctcgtactttgg
atgaatgacaaaggtgtaaccgtatgccacttagcaaatcgccagatcatctgtgttatc
gataaaccagaagattctcctcgaagtgacctttactggcccagagttgcctttccagag
attgatagaatcataataggctggggtaattacatatggtcgttaagggtatcgttaaaa
acagaagaagacggcactatagcttcatcgtctatgagtaagatcttaccttcgacagct
agcatatcctttagagcagtgcaagaaaaaaaagttgaaattgagcatatcttcaagcta
gatgtgctcatcagtggaatttctagttttaaagatgacctttggatggttctcacctat
gagcctcctactactgatgaggaaacaggaaagagagaatatccaaatccagatataaaa
ttgatcaactctactaatggagaagttgagtatgaagaagagttgggtttaaagaatatt
gctggacttggattgaacgactttttactaggtatgcatatcgaaactgttcccaagtac
tttataatttgtgcgagagatggagtcatagcagaagaactacaattgagtgacagattg
gcatggtttttggaaagggagaagtactacgaagcctgggaaataagtgaacatctagaa
tcgccttcaagacgtatgaattttggaattcagtatgtagacaacttaatcaaagccaac
aactggcaacaggcccaagaattcttgaataagttgttgtatattgatctcagcgattta
catgaactcgattccaagagtatagatgctatcgaaaatggtgttgagaaggtccacgat
aaatacgtcaaagaaatcatagagcaatggattacgtggtccaacatattcatagaaact
ggtcatatcagagaattgacagaaataattccaacaacggcagctctcaatatcccaaca
gagatatatcaacgtattcttgagttctgggttatcgaagacgtcacaaaatttcatgag
ctaattgagaaatgggatatggaactttacaatttcaagaacctacaatcgaagttagaa
gaattgcttgaacagcagtccgacaacgagacattaagacgaagtctagttgacctatgc
ataaagacagacgataatatcagagctgtaccacatttgataatcttgaaagatgccaac
attatcaagtttgtttccgaaaaccaaatactatccaatttcattgaaaatgtaccacaa
atgattcaaataaggtttgatggtgctgaattgaacacattaccaatcaatgtacttgaa
aagaggttggccgacgtagtggatatatttgtggagcagcgacacgatttcccgccccac
gagctaatccatttgtttaaagagcaccatatggatttcatgaactatttctatttggag
aaattgaaccaggtcgacgaatttgcgacgctgcaattcggtaatgagagaatcaaatat
tatgcacaatacaatagaagtctattgcttccattcttgaccaagcatagtggatatgat
attgccagggccatcgaactatgtgaaagtaatgattttacggaggaattggtttaccta
cttggaaaaattggcgaaaacagaaaggctttgatgttgatcatcaacaaactagaagat
ccaataaaagctatagcgtttgcgaagaatcagaacgacagagaagcgtggaatatcttg
cttgactattcaatggaaaagccggtatttataaaagcacttatagag

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