Phytophthora infestans: PITG_08558
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Entry
PITG_08558 CDS
T01333
Name
(RefSeq) pectin lyase, putative
Organism
pif
Phytophthora infestans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9475239
NCBI-ProteinID:
XP_002903922
UniProt:
D0NAW9
LinkDB
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AA seq
778 aa
AA seq
DB search
MALAQTLVASAGPVVSGTPPGFAAGTTGGGNAEPVYPKDIKELSTYLSDDEPRVIVLKQE
FNFMESEGITTEDGCHAKGAADCAAKKNGFEPQDTIQPSFTTCDNIMVKVTYDKAAKTPL
KVASNKTLVGEGTSGVLTGKGIEIKGNNVIVQNIHITDLNPQYVWGGDAIGISGDNGVIP
TGIWLDHVKVTSVGRQMIVIHLSGALGVTISNSDFDGKTKYSSSCDGHHYWGFIITGAKT
EVTLVGNAIHGMSGRSPKIGGSKDNVIAVHAVNNYFYDNSGHAFDVSQRGYVLAEGNYFD
NVKTPNQPDPDGNIFILASAGDCKETIGRDCELNALTDSGTLTSNKEEESKKPISTYTTQ
IEEYKASAATKLAVASDNFGVGELGGNSVTQSSGSEAPSQGTPAPATPESPSIQGSPANG
ALSPEDPKHTGLSTSTSTSSSVIGAPIGFASGTIGGGSAEPVYPKDIKKLGTYLSDKEPR
VIVLKQEFKFIDSEGSTTEKGCHSKNNMDCIAKKNGFEGQDTIETDFSKCDGASIDVTYD
NAAITPLPITSDKTLIGEGTKGVLNGKGILVKGSNVIIQNIHITNLNSHLVWGGDAIGIS
GDGNNAPKGIWIDHVKVSSIGRQMVVTHFSGASGATISNSDFHGNTKYSQSCDGRHYWGF
LILGKKTEMSLLGNYIHMTSGRSPKIGGTEGDVSVVHAANNYFEDNTGHAFDVVTGGSVL
AEGNNFDSVKTPNQPDPAGNIFIPASAGDCKATIGRDCEVNVLADSGSFTNRRELWCW
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcactggcccagactttagtcgctagcgctggtccggttgtttcaggtacaccacca
ggattcgcagccggcacaaccggcggtggcaacgccgagcctgtctatcccaaagatatt
aaggagctctcgacgtacctcagtgatgatgagcctcgtgtaattgtactgaagcaggaa
ttcaacttcatggaatctgaagggatcactacggaggacggttgtcatgcaaagggagca
gccgattgtgccgcgaagaagaacggcttcgagccgcaagatacgattcagccttccttt
accacatgtgacaatatcatggtgaaggtcacgtacgacaaggcagccaagaccccgctg
aaggtggccagtaacaagactttggtaggtgagggcacaagcggcgtgctcaccggtaag
ggaatcgagatcaaaggcaacaacgtgatcgtccagaacatccacatcacggacttgaac
ccgcaatatgtttggggtggtgacgccatcggcatcagcggagacaacggcgttatcccg
acaggcatttggctcgaccacgttaaagtgacaagcgtcggacgccagatgatcgtcatc
cacctctctggggctttgggagtcaccatcagtaattccgactttgacggcaagacgaag
tattcatcgtcttgtgacggtcatcattactggggattcattatcacgggtgcgaagacg
gaggtgactctggtaggaaacgccatccacggaatgtctggaagatctccgaaaatcgga
ggctccaaagataacgtcattgcggtccacgccgtcaataactatttctacgataacagc
ggccacgcgtttgatgtctcgcagcgaggatatgtgttggcggaaggcaactactttgat
aatgtgaagacccccaaccaaccggacccggatggaaacatcttcatccttgcttcggct
ggtgactgcaaagaaactatcggccgtgactgtgagttgaatgcacttactgacagtgga
accttgaccagcaacaaggaggaggagtccaagaagccgatcagcacgtacacgacgcag
attgaagaatacaaggcgtctgccgctacaaagctcgccgttgccagtgataacttcggc
gtcggggagctgggtggcaacagcgtgacgcagtcgagtgggtctgaggccccttctcaa
ggaacccctgctccagcaacacctgagtcgccctcgatccaaggatcacctgcaaatgga
gccctgtcgccagaggatccgaagcacacgggactcagcacatcaacttctaccagctca
agtgtcatcggagctccgataggcttcgcgtcgggcacaatcggcggtggtagcgcggag
cctgtgtatcccaaagacatcaagaaactcggaacgtatctgagtgacaaggaaccccgt
gtaatcgtgctcaaacaagagttcaagttcatcgattcggaaggatcaacaactgaaaag
ggatgccactccaagaacaacatggactgtattgccaaaaagaatggcttcgaaggccaa
gacacgatcgagacggacttcagcaagtgtgacggtgcttctatcgatgtgacctacgac
aacgctgccatcactccactgccaattacaagcgacaagacgctgatcggtgaaggcact
aagggagtcctcaatggcaagggcatcctcgtcaagggcagcaacgtgattatccagaac
atccacatcaccaacttgaactcgcatcttgtgtggggtggagacgcaattggcattagt
ggcgatggaaataatgcccccaagggcatttggatcgaccacgtcaaggtttccagtatc
ggacgtcagatggtcgtcacccacttcagtggtgcctcgggggctaccatcagtaattcg
gacttccatggcaacaccaagtactcccaatcatgcgatggtcgtcattattggggattc
ttgattctcggtaaaaagaccgaaatgagtttgctgggtaactatattcatatgacttcg
ggtcgatcacctaagatcggaggcaccgagggagatgtctccgttgttcacgctgccaac
aactacttcgaagacaatactggacacgcctttgacgttgtaaccggcggatctgtgttg
gctgaaggcaacaacttcgatagtgtgaagacgcccaaccagcctgacccagccggaaac
atcttcatccctgcttcagctggagactgtaaggccaccattggtcgtgactgtgaagtg
aacgtgcttgctgacagtggaagcttcaccaatcggcgggaactttggtgttggtga
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