Paenibacillus sp. IHBB 10380: UB51_17835 Help Entry UB51_17835        CDS       T03836                                  Name (GenBank) DNA polymerase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism pih  Paenibacillus sp. IHBB 10380 Pathway pih03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:pih00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     UB51_17835  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pih03400]     UB51_17835 Enzymes [BR:pih01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      UB51_17835 DNA repair and recombination proteins [BR:pih03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      UB51_17835 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol Motif Other DBs NCBI-ProteinID:  AJS60022 UniProt:  A0A0D3VE87 LinkDB All DBs Position 3948123..3949007 Genome browser AA seq 294 aa AA seqDB search MKRNLNGSIQINGHSLLITNPDKLLWPEVGITKAIYLQKLAFLAPYLLTYCRDRLLTTIR YPHGVGGTFFYQKNAPEPLPPYVSTSSHEDINYILLNGLPELLWLGNLASLEFHPSLHYA GSDLPCEWMIDLDPSMEEEPRIMEAANIVGDILSSLGLQSVPKTSGATGVQIIVPIEQGI TFEELRSIGHFVGQYVTAKHPHLFTLERLKKHRGDNIYFDYLQHYGGKTLAAPYTPRART LATVSTPLTWDEVRQDVRPSDFHLLNIEQRLQVKGDLIAALPPQPVRQIIKQLV NT seq 885 nt NT seq  +upstreamnt  +downstreamnt ttgaagaggaacttaaatgggagcatacagattaatggtcattccttactaattaccaat ccggacaagttgctttggcccgaagtaggtattacgaaggccatctacttacaaaagtta gctttcctcgctccctatttactcacctactgccgtgaccgacttcttactaccattcgt tacccacatggcgttggcggcacttttttttatcagaaaaatgcacctgaaccgctgcca ccttatgtatctacgtcttcgcatgaagatattaactatattctgctcaatggactccct gaactgttgtggctcggaaatttagcttcgttagaatttcacccttcccttcattatgct ggaagtgatctgccctgtgagtggatgattgatctagatccatcaatggaagaggagccg cgcattatggaagccgccaatattgtaggggatattctgtcctcccttggactacaatct gtacccaaaacgtctggagctacgggagtccagatcattgtacccatcgagcaagggatt acgttcgaggaactgagaagcataggtcattttgtaggtcaatatgtcaccgcaaaacat cctcatttgttcactttagaaagactaaagaaacaccgcggtgacaatatctatttcgat tacttgcagcattatggaggaaaaacattagccgctccttatacaccaagggcccgtaca ctagctaccgtatctacccctctaacgtgggatgaagtgaggcaagacgtccgtcctagc gacttccatcttcttaatatcgagcaaagacttcaagtcaaaggtgatctgatcgcagcc ctccccccccaaccggttaggcagattattaaacagttagtatag

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