Paenibacillus sp. IHBB 10380: UB51_23710 Help Entry UB51_23710        CDS       T03836                                  Name (GenBank) DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism pih  Paenibacillus sp. IHBB 10380 Pathway pih03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:pih00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     UB51_23710  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pih03400]     UB51_23710 Enzymes [BR:pih01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      UB51_23710 DNA repair and recombination proteins [BR:pih03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      UB51_23710 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  AJS60960 UniProt:  A0A0D3VFK1 LinkDB All DBs Position complement(5229550..5230500) Genome browser AA seq 316 aa AA seqDB search MKLNPIRPFEPIRTEIIPTGPQWITQVKWDGVRMLTYYDGLTVRLANRKLNDRTQQYPEF QSPNVYCSASSFIIDGEIVAWEEGKPSFHEVMKRDSARKQQSIELASRQISVTYIVFDVL FANGEWVIDQPLSVRQNLLNEIITPQPHVQIAQSFKEGSTLFEAIKQQGMEGIICKNIDS SYIINGKDNRWQKVKTEQDLYAVVGGLTYKDGVVSSLLLGLFNEEGNYIYIGNAGAGKLT MKEWAALTSRMLPIQIDTNPFSNVPQRSKGAIWLKPTIVVKVNFLEWTHSGTLRHSCIQG VIEDMSISDCRFSQNK NT seq 951 nt NT seq  +upstreamnt  +downstreamnt atgaaacttaatcctattagaccgttcgagcctatacgtactgagatcatacccacaggt ccacagtggatcactcaagtaaagtgggatggcgttagaatgcttacctattatgacggg cttaccgtcagattggcgaatcgtaaacttaacgatcgcacgcagcagtatcctgaattc cagtctcctaacgtctactgctcagcatcatccttcattattgatggggaaattgtagct tgggaggaaggtaaaccttcattccatgaagttatgaaaagagatagcgcccgcaaacaa cagagtattgaattagcttcaagacaaatctctgtgacttatattgtttttgatgttctt tttgcaaatggtgaatgggtcatagatcagcctctatctgtgagacagaatctcctaaac gaaatcatcacaccacaaccccatgtacaaattgcccagagtttcaaagaaggtagcact ttatttgaggctattaaacaacagggtatggaggggattatatgcaaaaatatagacagc tcctatatcatcaatggcaaagataatcgttggcaaaaggtaaaaacggagcaggactta tatgccgtggtaggtgggctaacgtataaagatggcgtcgtcagctcgcttcttctaggt ctctttaatgaagaagggaattatatatacattgggaatgctggagccggaaaattaacg atgaaggaatgggccgctctgacgagtaggatgcttcccatacagatagatacaaaccct ttctcgaacgttccccagcgaagcaagggggctatttggttaaaaccaactatcgtggta aaagtgaattttctagaatggacgcatagtggcaccttaagacactcttgtattcaaggt gtcatagaggatatgtctatatccgattgtcgtttcagtcagaataaataa

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