Psychromonas ingrahamii: Ping_0582
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Entry
Ping_0582 CDS
T00450
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pin
Psychromonas ingrahamii
Pathway
pin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ping_0582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pin03019
]
Ping_0582
Enzymes [BR:
pin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Ping_0582
Messenger RNA biogenesis [BR:
pin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Ping_0582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ABM02436
UniProt:
A1SSH1
LinkDB
All DBs
Position
complement(760879..762258)
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AA seq
459 aa
AA seq
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MFTKKSEQKQIPAADPFKIPRESHNLSRKDIDENALKVLYRLHNAGFRALLVGGGVRDLL
LGLKPKDFDITTNATPEEVKALFRNCRLIGRRFRLAHILFGREVIEVATFRGHHDDDNGQ
DAQKVKQSKAGMLLRDNVYGSLEEDAERRDFTVNALYYDIADFAIYDFCNGMKDLQERRL
TLIGDPEVRYREDPVRMIRAIRFSAKLDLTISEECAEPIRRLAPLLQDIPAARHFDEVIK
LLLSGQGLVTYRLLKEYKLLQVLFPILFKDGEDDKATQLIEQALTDTDRRIAQGKHLTPA
YIYAIILWYPLEQRAQEMAFEGGLDYYDAFLLAMNEVLSIQVKTIAIPKRFTAAVRDIWV
LQLRLPRFGGKRAQRVYQHIKFRAAFDFLSLRAKVEQSSELAELTAWWQEYQNHNKLPDH
SYAGNASKATEVKPADKKPYKKRRYPNKKHKKTETTGVD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaaaaaaagtgaacaaaaacaaatcccagcagcggatccctttaaaatcccg
cgagagtcacacaatctctcccgtaaggacatagatgaaaacgccttaaaggtactttat
cgccttcataacgcgggattcagggcactattggtgggcggtggtgtgcgtgatttatta
cttggcctaaaacctaaagattttgacattacgaccaatgcaacacccgaagaggttaaa
gctttattccgtaactgccgtttaattggccgtcgctttcgtctcgcgcatattttattt
ggccgtgaagtgattgaagtggctacttttcgtggtcatcacgatgatgataatggtcag
gatgcacaaaaagtaaaacaatcaaaagcgggcatgttactgcgcgataatgtttacggc
tcgttagaagaagatgctgagcgtcgtgattttaccgttaatgccctttattacgatatt
gctgattttgccatttatgatttttgtaatggcatgaaggatttacaagagcgcaggcta
accttgattggtgatccggaggtacgttaccgggaagatccggtgcggatgataagggct
attcgcttttcagcaaaattagatcttaccatcagtgaagagtgtgcagagcctattcgc
cgtttagcccccctcttacaagatataccggctgcgcgccattttgatgaggttattaaa
ttactgctttcaggccaggggttagtcacttatcgtttattaaaagaatacaaattatta
caggtattatttcccattctctttaaagatggtgaagatgataaagcgacccagctaatt
gaacaggcactgaccgatacggatcgaagaattgcgcaaggtaagcaccttaccccggct
tatatttacgcaattatcctctggtatccgcttgagcaacgtgcacaggagatggctttt
gaaggggggttagattattatgatgccttcttattagcaatgaatgaagtccttagcata
caagtcaaaacaattgctattccaaaacgttttacggcagctgttcgtgatatttgggtg
ttgcagttacgtttacctcgatttggcggaaaacgcgcacaacgagtttatcagcacatt
aaattcagggctgcttttgattttttatcgctgcgtgcaaaagtagagcaaagctcagaa
ctggctgaattaactgcgtggtggcaggaatatcaaaatcataataaattaccggatcac
agttacgctggtaatgcgagcaaagccactgaagttaaacctgcggataaaaaaccctat
aaaaaacgcagataccccaataaaaaacataaaaaaacagagactactggcgttgattag
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