Pseudomonas izuensis: LAB08_R10730
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Entry
LAB08_R10730 CDS
T08555
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00300
Lysine biosynthesis
piz01100
Metabolic pathways
piz01120
Microbial metabolism in diverse environments
piz01230
Biosynthesis of amino acids
Module
piz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LAB08_R10730 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
piz01002
]
LAB08_R10730 (dapE)
Enzymes [BR:
piz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LAB08_R10730 (dapE)
Peptidases and inhibitors [BR:
piz01002
]
Metallo peptidases
Family M20
LAB08_R10730 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
BCX66457
LinkDB
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Position
complement(1206001..1207152)
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AA seq
383 aa
AA seq
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MTAQADLSPTLQLAIDLIRRPSVTPVDADCQKQMMQRLGDAGFMLEPMRIEDVDNFWATH
GNHDGPVLCFAGHTDVVPTGPVTAWQIDPFNAVIDEHGMLCGRGAADMKGSLASMTVAAE
RFVADYPDHKGKVAFLITSDEEGPAHHGTKAVIERLVARKERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNVNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHGLDWHIDWALSGLP
FLTEPGALLDAVSSSIKDITGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccaagccgacctttcgccgaccctccaactcgccatcgacctgatccgccgt
ccgtccgtgacgccggtcgacgccgattgccagaagcagatgatgcagcgcctgggcgat
gccggtttcatgctggaaccgatgcgcatcgaagatgtggataacttctgggccacccac
ggcaaccacgacggcccggtgctgtgcttcgccggtcacaccgacgtggtgccgacaggt
ccagtgaccgcctggcagatcgacccgttcaacgcggtaatcgacgaacacggcatgctc
tgcggccgtggcgcggcagacatgaaaggtagcctcgcgtccatgaccgtggcggccgag
cgtttcgtcgccgactacccggatcacaagggcaaggttgccttcctgatcaccagcgac
gaagaaggcccggcgcaccacggcaccaaggcggtgatcgaacgtctggtggcacgcaag
gagcgcctggattggtgcatcgtcggcgaaccgtcgagcaccaccctggtgggtgacgtg
gtcaagaacgggcgtcgcggctccctcggcgccaagctcaccgtacgcggcgtgcagggt
cacgtggcctacccgcacctggccaagaacccgatccacctcgccgccccggccctggcc
gaactggccgccgagcactgggaccacggcaacgacttcttcccgccgaccagtttccag
atctccaatgtgaactccggcaccggcgcgaccaacgtcatccccggtgatctggtggca
gtgttcaacttccgcttctccaccgaatccaccgtcgaaggcctccagaagcgcgtcgcc
gacatcctcgacaagcatggcctggactggcacatcgattgggcattgtcgggcctgccg
ttcctcaccgaaccgggcgctctgctcgacgcggtgtcgtcgagcatcaaggacatcacc
ggtcgcgaaaccaaggcctccaccagtggcggtacctccgacgggcgtttcatcgcgacc
atgggcacgcaagtggtcgaactggggccggtcaacgcgaccatccaccaggtcaacgag
cgtgtattggcggccgacctcgatgtactgaccgagatctactaccagaccctgatcaag
ttgctcgcctga
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