Pseudomonas izuensis: LAB08_R16110
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Entry
LAB08_R16110 CDS
T08555
Name
(GenBank) GGDEF domain-containing protein
Organism
piz
Pseudomonas izuensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE
PAS_3
PAS
PAS_9
PAS_4
PAS_8
DUF6535
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
BCX66987
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Position
1773894..1776293
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AA seq
799 aa
AA seq
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MSLHAVRPKILGFISEDVSAWLVALLVLIVGGILTGLLAWSTLNLFHHQLRQRFQLLASE
RYSRIEERFEDQEQRLDGLRRFFANSDSVTREEFNGYTQPLLHRTQAYSYAERVRGDQRA
AFERRVRDEGLSGFTLRELNADGQLQLAAERDEYVVVLYSQTQSKLGSPLGYDLLAQPMR
RATLERADQHGRMAVSQPMYLVSIEPAYARGVLLVAPVMLRNNPDGATGKPFGYVMAVIS
MRQLLADDLPEAGRDYLAVRILDLSTEEQHEVLFQSPNPPAISELSATRLLRLADHEYQV
DIQPSEAFLQANHSSVTTLVVLGSLLSVLLSALLYVLVSQRQRALKMVEQRTQELRAREQ
ELRGTHGQLRGVLNAATQVAIIATDLRGVITTFNAGAEQMLGYTAAEVVGHMTLENLHLP
RELAARSAELSTRFGKPVPACHAMLVEGSIEGGHEAREWTLVRGDGSYLMVNMLATPVLD
EQGLWVGHLAVCIDITERKRVHEALAARDLLLKKLSAHVPGGIYQFKMEFDGRFSVIYAS
DGIREIYELDPDVLLLNAEAIFTRIHPQDTTRVRASIRASADTLSPWREEYRVQLPQRGL
RWVRGEATPEELPGGGVLWHGYISDISDLKRVEEELRALSVTDSLTGIHNRRYFQERLTG
EMARVERGGGELSVIMLDIDHFKRINDQHGHAVGDRVLQAVCERIGQRLRRTDVFCRLGG
EEFMVLCPDIGGEQAHVLALELWQSLRSAPIDEVGVVTASFGIASWRVGEGADALLLRAD
SGVYAAKQAGRDRVQGEMN
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgcacgccgtgcgcccaaagatcctgggttttatcagcgaagacgtttcggcc
tggctggtcgcgctcctggtattgatcgtcggcgggattctcacgggattgctggcctgg
tcgacgctcaacctgtttcaccatcaattgcggcaacgtttccaactgctggccagtgaa
cgctacagccgtatcgaagaacgtttcgaagaccaggagcagcgcctcgacggcctgcgc
cggttctttgccaattccgattcggtgacccgagaggaattcaacggatatacccaacct
ctgctgcaccggacccaggcgtactcgtacgccgaacgggtcaggggagatcagcgggcg
gctttcgagcgccgcgtgcgggacgagggcctgagtggttttaccttgcgcgaactcaat
gccgacggccagctgcaattggccgccgaacgggatgagtacgtggtggtgctgtacagc
cagacgcaaagtaaactgggttcgccgttgggctacgacctgctggcccagccgatgcga
cgcgctaccctcgagcgggccgaccagcatgggcgcatggcggtgtcgcaaccgatgtac
ctggtcagcatcgaaccggcttatgcgcggggtgtgctgctggtcgcgccggtcatgttg
cgcaataacccggatggcgcaaccggcaagccatttggttatgtcatggcggtgatcagc
atgcgccagctgttggccgacgacttgccggaggcgggccgtgattatctcgcggtgcgc
attctcgacttatccaccgaggaacaacacgaagtactgttccaatcaccgaacccaccc
gccatcagtgagttgtccgcgacccgactgttgcgcctggccgatcatgaatatcaagtc
gatatccagcccagcgaggcgttcctgcaggccaaccattcgtcggtgaccaccctggtg
gtgctcggaagtttgctcagcgtactgctcagcgccttgctctacgtgctggtcagccag
cggcaacgggcgctgaaaatggtcgagcagcggacccaggaactgcgcgcccgcgaacag
gaactgcgtggcacccacggccaattacgcggagtgctgaatgccgccacccaggtggcg
atcatcgcaacggacctgcgcggagtgatcaccaccttcaatgccggtgccgagcaaatg
ctcggctacaccgccgccgaagtggttgggcacatgaccctggaaaacctgcacttgccc
cgggagctcgccgcacgttccgccgagttgagcacgcgattcggcaagccggtgccggcc
tgccacgcgatgctggtcgaaggcagcatcgagggtgggcacgaagcgcgggagtggacg
ctggtgcggggcgatggcagctatttgatggtcaacatgctggccacgccggtgctcgac
gagcaaggcttgtgggtcgggcatctggccgtgtgcatcgacatcaccgaacgcaagcgc
gtgcatgaggcgctggctgcgcgggacctgttgttgaagaaactcagtgcccacgtgccc
ggcggtatttaccagttcaagatggagttcgacggccgcttcagtgtcatctatgccagc
gacggtattcgcgagatctacgaactcgatccggacgtgttgctgctcaatgccgaagcg
atcttcacgcggattcatccgcaggacacgacgcgcgtgcgcgcgtcgatccgcgcctcg
gcggataccctcagcccctggcgcgaggagtaccgtgtgcaactgccccagcgtggcctg
cgctgggtccgcggcgaggccacgccggaggagcttcccggtggcggcgtactgtggcat
ggctacatctcggacatttccgatttgaagcgagtggaagaagaactgcgcgcgttgtcg
gtgaccgattccctgaccggtattcacaatcgccgctacttccaggagcgcctgaccggc
gagatggcccgtgtggagcgtggcggcggcgagctgtcggtgatcatgctcgacatcgac
cacttcaaacgcatcaatgaccaacacggccacgccgtgggcgatcgggtgttgcaagcg
gtgtgcgagcgcattggtcaacggttgcggcgcacggatgtgttctgccgcctggggggc
gaagagttcatggtgctgtgcccggacatcggcggcgaacaggcccatgtgctggcgctg
gagctgtggcaaagcttgcgcagtgcaccgatcgacgaagtgggggtcgtcacggccagt
ttcgggattgccagttggcgggtcggcgagggcgcggatgcgctgttgctgcgggcggat
tcgggggtttatgcggcgaagcaggcgggaagggatcgggtgcagggggagatgaactga
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