Pseudomonas izuensis: LAB08_R50720
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Entry
LAB08_R50720 CDS
T08555
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00470
D-Amino acid metabolism
piz00550
Peptidoglycan biosynthesis
piz01100
Metabolic pathways
piz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LAB08_R50720
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LAB08_R50720
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LAB08_R50720
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
piz01011
]
LAB08_R50720
Enzymes [BR:
piz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LAB08_R50720
Peptidoglycan biosynthesis and degradation proteins [BR:
piz01011
]
Precursor biosynthesis
Amino acid ligase
LAB08_R50720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATP-grasp_5
GARS_A
TTL
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
BCX70405
LinkDB
All DBs
Position
complement(5685079..5686059)
Genome browser
AA seq
326 aa
AA seq
DB search
MTAAYANLVSTVAPKDFGRVAVLFGGKSAEREVSLKSGNAVLDALQSAGVDAFGLDVGDD
LLQRLLNEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWH
SLGIPTPRHAVLSSEADCISAATELGFPLIVKPAHEGSSIGMAKVTSASELIDAWKAAST
YDSQVLVEQWIQGPEFTIATLRDQVLPPIALGTTHSFYDYDAKYIANDTQYRIPCGLDSA
KEKELMDLTAKACEALGIAGWGRADVMQDAEGQFWFLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAESVGRNAASQQEPRG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcctacgccaacctcgtctccactgtcgcgccgaaagatttcggccgcgtc
gccgtgctgttcggcggcaagagtgccgagcgcgaagtgtccctgaagtcgggcaatgcg
gttctcgatgcgctgcaaagcgcgggcgtggacgcgttcggcctcgacgtgggcgatgat
ctgctgcagcgtctgctgaacgaaaaaatcgaccgcgccttcatcatcctccacggtcgt
ggcggtgaagacggcagcatgcaaggcctgctcgaatgcctgggcattccttacaccggc
agcggcatcctcgcctcggcattggccatggacaagctgcgcaccaagcaggtctggcac
agcctgggcattccgacgccacgtcacgcggtgctgagcagcgaggccgattgtatttcg
gcggccacggaactgggcttccctttgatcgtcaaaccggcgcatgaaggttcaagtatc
ggtatggccaaagtgacttccgcgtccgaattgatcgacgcctggaaagcggccagtacc
tacgattcgcaagtgttggtcgagcaatggattcaaggtccggagttcaccatcgccacc
ctgcgtgaccaggtgttgcctcccattgccctgggcacgacgcacagtttctacgactac
gacgccaagtacatcgccaacgatacccagtaccgcattccgtgcgggctggacagcgcc
aaggaaaaggaactcatggacctcacggccaaagcctgtgaggcgctgggtattgccggt
tggggcagggcggacgtgatgcaggacgccgaagggcagttctggttcctggaagtcaac
accgcgccgggcatgaccgatcacagcctggtgccaatggcggcccgtgcggccggcctg
gatttccagcaactggttctggccattctggccgagagcgttggccgcaacgctgccagt
cagcaagagccgcgaggttaa
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