Pseudomonas izuensis: LAB08_R55520
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Entry
LAB08_R55520 CDS
T08555
Name
(GenBank) bifunctional diguanylate cyclase/phosphodiesterase
Organism
piz
Pseudomonas izuensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
SBP_bac_3
PAS_9
PAS
PAS_3
PAS_8
PAS_4
Motif
Other DBs
NCBI-ProteinID:
BCX70865
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Position
6183621..6187367
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AA seq
1248 aa
AA seq
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MPRLPTVLFLLSLMTWTATAGALTLTDEERSWLAAHPDLRLGVDASWPPFEFRDDQGRYQ
GLAADYINLIRQRLAVKLTPIEPVSWTVVLEQARQGKLDLLPGIMSTPERQAYLSFTRPY
LDFPIVILAHVGGPQPRKIEDLYGLKIAVVENYAPHELLRTHNPDLNLVAMPNVSSALQA
LATDEVDAVVGDLASSVWSLRQLRLDGLYVSGETPYRYQLAMGVPPNNKMLVSILDKVLA
DMTPAEISAIQEHWVGNVLDHRTFWSDLLVYGLPGLLLLVTVLATVIRINRRLSSEIARR
IDLEQELRSSEYHYRGLVESLSAIAWEARMSDFTYSYVSPHAEDLLGYPLSHWLIPGFWR
NIIHPADLTRAQNFCDHEVLAGRDHSLDYRVITADGRCLWVRDIVSLIEHGHEPVMRGLM
IDISETKRTEEALRLSEQKFASVFQQCPDILVIARLSDGCLLEVNEAFEEQIGLRAEDVI
GQTATDLNIWGVPGVGPGLLQRLQAGSIRNLEMPFRRSNGQVFTGLISAEPFDLDTTPAL
VVVVRDITQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFSRITGFNS
AMSVDRSALDLGIWVNLNERKQMLDLLHRDGFVRDFSCHIRRSDGQIRLCEVSSRPLPIG
DEDCMLTIARDITERHLMQEKLQQAATVFESTAEGVLITDTQQHISAVNRAFTEITGYSE
SEALGHTPRLLASGLHDSAFYAAMWHQLTAEGHWQGEISNRRKNGELYPSWLTISAVRNR
DKFITHFVAVFADISSLKHAQAKLDYQAHHDPLTGLPNRTLFESRLLTALNTHRENGGQG
AVLFLDLDRFKHINDSLGHPVGDLLLKGIAVRLKEQLRDIDTVARLGGDEFIILLPGLQQ
PSDADNIATKLLNCFTAPFQAGEHEFFISSSIGTSLYPQDGCDVATLIKNADAAMYRSKA
KGRNRVESYTCDLTAQASERVALEHELRRAIERNELHLYYQPKISLDDYRLVGAEALIRW
RHPTFGDVPPEHFISLAEENGMILQIGDWVLETACRQMHEWNKTYMDLGPLSVNLAGAQL
RQPNLLSRIEQLLKDYRLKPGFLQLEITENFIMSQAEEALAVLHQLKQLGVQLAIDDFGT
GYSSLSYLKRLPLDILKIDQSFVRGLPDDPHDVAIVRAIIALGRSMQFTVIAEGVETQAQ
QQFLAYEGCEQIQGYIVSLPLPPDEFAATFLRTAVLDFSDSTAAKPSL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgcccagactgccgaccgtgctttttttgctgtcgctaatgacctggaccgcaacggct
ggcgcgctgactctaaccgacgaagaacgtagctggcttgcggcccacccggacttgcga
ctgggtgtcgatgcctcctggccaccttttgaatttcgcgacgatcaggggcgttaccag
ggtcttgcggcagactatatcaacctgatccgtcagcgattggccgtcaaactcacgcct
atcgagccagtcagctggacggttgtgctggagcaggccaggcaaggcaagctcgacctc
ttgccgggcatcatgtcgaccccggaacgccaggcttatctgtcgttcacccgtccttat
ctggatttcccgattgtcatcctggcccatgtcgggggcccccaaccacgcaagatcgag
gacctgtacggactgaaaatcgccgtggtggaaaactacgcgccccatgagttgctacgc
acccacaaccccgacctgaatctggtggccatgcccaacgtcagttcggctttgcaggcg
ttggccaccgatgaagtggatgcggtcgtaggcgatctcgcttccagcgtctggagcctg
cgccagctcaggctggacggtttgtatgtcagcggcgaaaccccctatcgctatcaactg
gccatgggcgtccccccgaacaacaagatgctggtcagcatcctggataaagtcctggcg
gacatgaccccggcagaaatcagcgccatccaggagcattgggtcggcaacgtcctcgat
caccggactttctggtccgatctgctggtttacggcttgccagggctgctactgctggtc
accgtgctggcgacggtcatccgcatcaaccgccgcctgagttcggaaattgcccgccgg
atcgatctggagcaggaactgcgcagcagcgaatatcactaccgcgggctggtggagagc
ctctcggccatcgcctgggaagcgcgaatgagcgacttcacctacagctatgtatcgccc
cacgccgaggatctgctgggttatcccctgtcccactggctgattccaggtttctggcgc
aacatcattcaccccgccgacctcacccgcgcgcagaatttctgcgatcacgaagtgctg
gccggacgtgatcacagcctggattatcgggttatcaccgctgacgggcgctgcctgtgg
gtccgcgatatcgtcagcctgatcgaacacggccatgaaccggtgatgcgcgggctgatg
atcgacatcagcgagaccaagcgcaccgaagaagcgctgcgtctgtcggaacagaagttt
gcttcggtgttccagcaatgcccggacattctggtcatcgcgcggctctccgacggctgc
ctgctggaggtcaacgaagcgttcgaagaacagatcggcctcagggccgaagacgtcatc
ggccagaccgccaccgacctcaatatctggggggttcccggtgtggggccgggattattg
cagcgcctgcaggccggcagcatccgcaacctggagatgccctttcgccgcagcaatggc
caggtgtttaccggcctgatctccgccgaacccttcgacctcgacacaaccccggcactg
gtggtggtcgtgcgcgacatcacccagctcaaggaaacccaacaacaactgcaaacttcc
gaagagaaatttgccaaggccttccatgcatccccggacggcttgctgctgtctcggcag
agtgatgggttgctgctggaagtcaacgaaggcttcagccgtatcaccgggttcaacagc
gcaatgtcggtggatcgctcggccctggatctggggatctgggtcaacctcaacgaacgc
aaacagatgctcgacctgctgcaccgcgatggcttcgtccgtgatttcagttgccatatc
cgccgcagcgacgggcagatccgcctctgcgaagtgtccagtcggccactacccattggc
gacgaagactgcatgctgaccatcgcccgggacatcaccgagcgccacctgatgcaggaa
aagctgcaacaggccgccacggtgttcgagagcaccgccgaaggcgtattgatcaccgat
acccagcagcacatcagcgccgtcaaccgcgccttcaccgagatcaccggctacagcgaa
agcgaagcactgggccataccccgcgcctgcttgcctcgggcctgcatgacagcgcgttc
tatgccgccatgtggcaccagctgactgccgaagggcactggcaaggcgagatttccaac
cggcgcaagaacggcgagctctacccgagctggctcaccatcagcgcggtgcgcaaccgg
gacaagttcatcacccacttcgtggcggtgttcgccgacatttccagcctcaagcacgcc
caggccaaactcgactatcaagcccaccacgacccgctgaccggcctgcccaaccgcacg
ctgttcgaaagccgtttgttgaccgcactcaacacccacagggaaaacggtggtcaaggt
gcggtgctgttcctcgatttggaccgtttcaaacacatcaacgatagcctcggccacccg
gttggcgatctgttgctcaagggcattgccgtgcgcctcaaggaacagttgcgtgacatc
gataccgtggcacgcctgggtggcgatgagttcatcatcctgctgcccggcctgcagcag
cccagcgacgccgacaacatcgccaccaaactgctcaattgcttcaccgcaccgttccag
gccggtgagcacgagttcttcatcagctccagcatcggcaccagtctttatccacaggac
ggttgcgatgtcgccacactgatcaagaacgccgacgcggcgatgtaccgctccaaagcc
aagggccgtaaccgggtcgaaagttatacctgcgacctcacagcgcaagccagcgaacgc
gtagcgctggaacacgaactgagacgcgccatcgagcgcaatgagctgcacctctactat
caaccgaagatcagcctcgacgactatcgcctggtcggggccgaagcactgattcgctgg
cgccacccgacctttggcgacgtgccgccggagcacttcatttccctggccgaagaaaat
ggcatgatcctgcaaatcggcgactgggtgctcgagaccgcctgccggcaaatgcacgag
tggaacaaaacctacatggaccttggcccgctgtcggtcaatctcgcaggcgctcagtta
cgccagccgaacctgctcagccgcatcgagcaattgctcaaggactaccgcctcaaaccc
gggttcctgcaactggaaatcaccgaaaacttcatcatgagccaggcggaagaagcgctg
gccgtgctgcatcaactcaaacagctgggcgtgcaactggcaatcgacgacttcggtacg
ggctactcgtccttgagctacctcaaacgcctgccactggacatcctcaagatcgaccag
tcgttcgttcgcggtttgccggacgatccccacgatgtcgccatcgtgcgcgccatcatc
gcactcggccgcagcatgcaattcaccgtgattgccgaaggcgtcgaaacccaggcgcag
cagcaattcctggcctatgagggttgtgagcagatccagggctacatcgtcagcctgccc
ctgccccccgacgaattcgccgcgacatttcttcgtacagccgtattggatttttcggat
agcacagccgcgaaaccgtcgctataa
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