Penaeus japonicus (kuruma prawn): 122244434
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Entry
122244434 CDS
T07703
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122244434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122244434
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122244434
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122244434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
122244434
NCBI-ProteinID:
XP_042858266
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MAASRKLQGEIDRCLKKVAEGVEQFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWLASGEIKDKSQLLENRKLIETQMERFKVVERETKTKAYSKEGLGAAQNKDPAQRE
REDLNNWLSSSIDTLNIQMDQFESEIESLLATQKKKKMDKDKSDRIEDLKEYIERHQYHI
KKLEILMRMLDNQSIDCDQIKMIKEDIEYYIESSQDPDFSENLGLYDDIDMEDLDYPTPE
ITVGKHVLGGSHDSTDGSTPSSACGSSPAPSPATNHSNDHDVPTTPHDKKRSNKNDESRS
VSSSSQPVKPLVVRPTTNSINTNNNISSNNSTTTSNSSSGSTTSIVVVNTNSSSKATPPP
STPTKPVLGSTSQTTPNNSSTSSGTSNHLITTSQQNSTGRHSPEPSGLINSGIVNNTSGS
GSNSSSSSSCSNSSSSSGNSVSNSTGSGSSSSSSSSSSSSTSSSSGSSNNSSSSTSSNSS
SNGLSSGVSSSVSVTSPQGSLAGSATTTPALPSGAPTPSAAPTHQGHTPAMNASDTAVSL
KAIAQKKVNEVNSSSITPSVLESSSCPVSNTTTSSTNTNANNNNNNNNSSTRTITEKSTT
TCEANIPPLLGVAPLGPAKLTVEHDLQFKMLQAAYYHMPHPSDSERLRVHLPRQPCQTPL
YYPQVSGSDLPVSPPMSDTVDFFQRLSTETLFFIFYYMEGTKAQYLAAKALKKQSWRFHT
KYMMWFQRHEEPKAITDEYEQGTYIYFDYENWGQRKKENFTFEYRFLEDRDLN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcgagaaaattacaaggtgaaattgaccggtgcctgaaaaaggtcgctgag
ggcgtggaacagtttgaggacatctggcaaaaagtccacaatgccaccaacagtaaccaa
aaggaaaaatatgaagcggaccttaagaaggagattaagaagctccagagattacgagac
caaatcaagtcctggttggcctcgggggaaatcaaggacaagtctcaactccttgaaaat
cggaagttgatagagactcaaatggaaagatttaaagttgtagagagagaaacaaagacc
aaagcgtatagtaaggagggcctcggggcagcacaaaacaaggatccagcccagcgggag
agagaagacctcaacaattggctcagttcctctatagacacgctaaatattcagatggac
caatttgagtcagaaattgaatctttattggcaacgcaaaagaagaagaagatggacaaa
gacaagtcagatcggatagaagatctcaaggaatatatagaaagacatcaataccacatc
aagaagttagagattctaatgagaatgttagataaccagtccatagattgtgaccagatc
aaaatgatcaaagaagatatcgagtactacattgagtcatctcaggatcctgacttcagt
gaaaatctcggtctttatgatgacatcgacatggaagacctggattaccccactccagaa
ataactgtagggaaacatgtgctgggcgggagtcatgacagcacggacgggtcgacacca
tcttctgcgtgcgggtcctcgcctgccccgtctcctgccacaaaccattccaatgaccat
gacgtacccaccacccctcatgacaagaagagaagtaataaaaacgacgagtccagatca
gtcagttcatcaagccaacctgtcaaacctctggtagtgagaccaacgaccaacagcatc
aacaccaataataatattagttcgaacaacagcaccaccaccagtaacagcagctctgga
tctactacttccattgttgtggtcaacactaattcatcctcaaaggccacaccacctcca
tccacccccacaaagcctgtactaggttcaacttctcaaactactccaaacaacagtagc
acaagttcaggtacttccaaccacctaattaccacctcacaacaaaatagcacaggaaga
cattcaccagaaccaagtggattgataaatagtggtatcgtgaacaacaccagtgggagt
ggaagtaacagtagcagtagtagcagctgcagcaacagcagtagcagcagtggcaactct
gtatcaaacagtacaggtagtgggagtagcagcagcagcagtagcagcagcagcagtagc
accagcagcagcagtggcagcagcaacaatagcagcagcagtaccagcagcaacagcagc
agtaatggtctcagtagtggggtaagcagcagcgtgagtgtgacgtcaccgcaaggtagt
ctggcaggcagtgcaaccactacaccagcattaccttcaggggcaccaacgccatctgca
gctcccacacatcaagggcacacaccagctatgaatgcttcggacactgcagtatcttta
aaagccatcgcgcagaagaaggtcaatgaagttaattcttcgtcgataacaccatcagtc
ttagaaagcagcagctgccccgtcagcaacaccaccacgagcagcaccaataccaatgcc
aacaataacaacaacaacaacaactccagcaccaggaccattaccgagaagtccacaacg
acgtgcgaggccaacatcccgcccttgctgggtgtggcccctctcggtcctgccaagctg
acagtcgagcacgacctgcagttcaagatgctccaggcggcctactaccacatgcctcac
ccgtccgactcggagagactgagagtgcacctgccgcgccagccttgccagacgccgctc
tactatccacaggtgagcggctctgacttgccggtctcgcctcctatgtcagatacagta
gacttctttcagcggctgtcgaccgaaactctcttctttatattttattatatggaggga
acgaaagcccagtacctggcagcaaaagctctcaaaaagcaatcttggagattccataca
aagtacatgatgtggtttcaaaggcatgaggagcctaaggcaatcacagatgaatatgaa
cagggcacatatatctacttcgactatgagaactggggccagcggaagaaggaaaacttc
acgtttgaataccggttcttggaagaccgggatctgaactaa
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