Penaeus japonicus (kuruma prawn): 122247327
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Entry
122247327 CDS
T07703
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122247327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pja03041
]
122247327
Enzymes [BR:
pja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122247327
Spliceosome [BR:
pja03041
]
Complex A
U2 snRNP components
U2 related factors
122247327
Complex B
122247327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122247327
NCBI-ProteinID:
XP_042862473
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MSRDSRTAHRRRRSRSRSRSNERKRSRSRERERDRDRDRDRDRDRDRDRDRDRGRSRRSR
SRDRDRHRSRSRERRRSRSRERRSRSRDRSRSRERERDRRSRSRDKERDRKRSRSRSRER
ERDRKRNKRSKSHSPVKVKPPPPPPKPVEPPPPELKEEEETGLDFDPSKIDKEEAEKRLE
AEMQKRRERIEKWRAEKKKRELEAAKKEAEKGTLGANVPKVSIKAWSLEDDDEEEEGESR
EMEGKVEEEDEVDPLDAFMSGIQEEVRKINRVDMRGGVMKSTKPISVGTGEAGAKKPVII
MGVAKKVDAKKKGELMEQNQDALEYSSEEEGEDLKDTMASINSKGKKELVKIDHTAVEYV
PFRKDFYVEVPEIANMTKEEVDAYRAELEGIKIKGQGCPKPIKTWAQCGVSKRILEILKR
CNYEKPTPIQVQAIPAIMKGRDVIGIAKTGSGKTLAFLLPMFRHIVDQPPLEDTDGPIAI
IMTPTRELCMQIGKECKKFAKNNLRVCCVYGGTGISEQIAELKRGAEIIVCTPGRMIDML
AANSGRVTNLRRVTYVVLDEADRMFDLGFEPQVMRIIDNIQPGRQTVMFSATFPRQVEAL
AKKILTKPIEITVGGRSIVCKDVTQDVVMIEEDQKFLKLLEILGKFYEKGQTLIFVDKQE
SADSLFKDLLSHSYRALVLHGGVDQIDRDSTILDFKAGRVPIMVATSVAARGLDVKQLIL
VVNFDCPNHYEDYVHRCGRTGRAGNKGWAFTFITTDQPKFAGEVVRAMELSDTPVPEDLK
KFYEDYKQKMEGEGKKVKTGGGFHGKGYKFDESEANFASEKKKFEKAALGLADSDDEDIE
QDIDQQIESMLNTKRTVKEIKVTPMVAQSTGSTTTTSIPVGGPSASDKLELARKLAQRIN
LQHNIGKEAKGASQQAAEFILKGGATMQPTISAKTVAEQMAQKLNNKLNYQPRDDREEEE
EATEETHHKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGITVRGTFCPPGKNPPEG
ERKLFLAIESTSELAVSKAKAEIIRLIREELVKLRTSAGPVKAQGRYKVL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgagatagcagaactgcacacaggcgcaggaggtcccggagtcgctccagaagc
aacgaacggaagaggtcaagatcaagagaacgagaaagagacagagacagggacagagat
agggatcgggacagagaccgcgacagggaccgggatcgtgggaggtctcgcagatcccga
tccagagaccgggatcgccacaggtcaagaagcagggaaaggagaaggtcgaggtccaga
gagagacgctcaaggtcaagagatagatcaaggtcaagggagagagagagggacaggagg
tcacgttccagagacaaagagagggataggaagaggagcagaagcaggtcaagagaacgg
gaaagagacaggaagaggaataagagaagcaaatcacactctcccgtcaaggtgaagcca
cctcccccgcccccaaagcctgtagagccgccaccacctgaactgaaggaggaagaggag
accggtctagatttcgatccttcgaagatagacaaggaggaagcagagaaacgtctcgag
gctgagatgcagaaaaggagagagaggatagagaagtggagagctgagaagaagaaaaga
gagctagaggcagctaagaaggaggcagagaagggaacactaggagcaaatgtccctaaa
gtttctatcaaggcctggagtttagaagacgatgatgaagaggaagaaggagagagtagg
gagatggagggaaaagtagaagaggaggatgaagttgatcctcttgatgccttcatgtca
gggattcaagaagaagtgagaaaaatcaatcgcgttgatatgcgaggtggtgttatgaag
tccaccaaacccatttcggtgggtacaggggaagcaggggcaaagaaaccagtcatcatc
atgggagtggccaagaaggtggacgctaagaagaagggcgagctgatggagcagaaccag
gacgcactggagtattcatcggaggaggagggagaggacctcaaggataccatggccagt
atcaactctaagggcaaaaaggaattagtgaagattgaccatacagcggttgagtatgtt
ccctttaggaaggacttttatgtggaggttcctgaaattgccaacatgacaaaggaagag
gtggatgcatacagagcggaattagagggcatcaagatcaaaggtcagggttgccctaaa
cctatcaagacatgggctcagtgtggggtcagtaagcgaattttggagatactgaagagg
tgcaattacgaaaaaccaacacctattcaggttcaggccattcccgccatcatgaaaggc
cgtgacgtgatcggcattgccaagacagggtcagggaagaccttggctttcctcctgcct
atgttccgccacatcgtcgaccagcctccccttgaggacacagacggacccatagctatc
atcatgacgccaacgagagaactatgcatgcagataggaaaggaatgcaaaaaatttgcc
aagaacaacctgcgggtttgctgtgtctacggaggcacgggaatctcggaacaaattgcc
gagctgaaacgcggggcggaaatcatcgtctgcactcctggccggatgatcgacatgtta
gctgcaaacagtggcagagtgaccaaccttcggagagtgacatacgttgttctcgatgag
gctgatcgcatgtttgatctaggttttgagccccaggtcatgagaataatagataacatt
caacctggccgccagacggttatgttctctgcaactttcccaaggcaagtggaggcactg
gccaagaagattctcaccaagcctattgagatcacagtaggtgggaggtccatcgtgtgc
aaggacgtgacgcaggatgtggtcatgattgaggaggatcaaaagttcttgaagctcctg
gagatcctcgggaagttctacgagaagggccagacgctcatctttgtggacaagcaggag
agtgcggattctttgtttaaggatctccttagtcactcctatcgtgcacttgtgctccat
ggaggtgtcgatcaaatagacagagacagcaccatcctagacttcaaggcaggaagggtt
ccgataatggttgcgacctcagtggcagcaagaggtcttgatgtaaagcaacttattctg
gttgttaactttgactgtcctaaccattatgaagactatgttcacagatgtggtcggact
ggtcgggcaggcaacaagggatgggcattcaccttcatcactactgaccagcccaaattt
gcgggagaggttgtacgtgctatggagctgtcagacacacctgtacctgaggacttaaag
aaattctatgaggactacaagcagaagatggagggggagggcaagaaggtaaagactggg
ggcggcttccatggcaagggatacaaatttgatgagtccgaggccaacttcgcgtcagag
aagaagaagttcgagaaggcagcactgggtctggccgactccgatgatgaggatattgag
caggacatcgaccagcagattgagagcatgttgaacaccaagaggactgtcaaggaaatt
aaagtgaccccaatggtagctcagtccacgggcagcacaaccaccacgagcatacccgtc
ggaggaccctctgcctcggacaaactagagctggcacgcaagctggcccagcgcatcaac
ttgcagcacaacatcggcaaggaggccaagggggcgagccaacaggcggcagagttcatt
ctcaagggaggagccacaatgcagcccaccatctctgccaaaacagtggctgaacagatg
gcccagaaattgaacaacaagctgaactaccagcctcgtgacgaccgcgaagaggaggag
gaggccacggaggagacacaccacaagtacgaggaggagctggagatcaacgacttcccc
cagcaggccaggtggagagtgaccagcaaagaggccctggcccagatatccgaatattcc
gaagctggaatcaccgtcagaggaaccttctgccctccgggcaagaatcctccagagggc
gaacgcaaactgttcctggccatcgagtccacctcagaactggcggtgtccaaggctaag
gctgagatcatccgcctgatccgtgaggaactggtgaagctgaggacgagcgcagggccg
gtgaaggcgcaaggaagatacaaagttttgtaa
DBGET
integrated database retrieval system
