Penaeus japonicus (kuruma prawn): 122252847
Help
Entry
122252847 CDS
T07703
Name
(RefSeq) tropomyosin-1, isoforms 33/34-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122252847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122252847
03036 Chromosome and associated proteins [BR:
pja03036
]
122252847
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122252847
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122252847
PBAF complex
122252847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Bacillus_HBL
GCN5L1
TPR_MLP1_2
SPAM
Motif
Other DBs
NCBI-GeneID:
122252847
NCBI-ProteinID:
XP_042871461
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MAAEIPSSGIRARPVPDVFAPGLRMSLPPNYRQVAMMGTTPAPGPTHVYMPASPMMSNIL
KATTTSSSSTSSGNGGSGSSKGRPADRLARTPSTPSSSSKGVGEANVPSPFTTPHHGNPA
FNPQKMGTGKGVSKHSGEGRIPKPPKAPDKPLMPYMRYSRKVWDQVKAANNDLKLWEIGK
IIGSMWRDLPEADKQDYVDEYESEKLEYEKALKSYHASPSYQAYLNAKTKGTLVPTGTIA
TEEKEILDRSSSTATVGSKLDRRIDIQPAEDEDDYDDGLSVKHVSHSRYIRNHRLINEIF
SDTMVPDVRSVVTSQRLTVLRRQVQSLTMHQKKLETELQQIEEKFEAKKRKFIEAGDSFQ
SELKKVKATAPKLDETSFASMVERQKEVLRREAEERQRSAQGLPSRPPSTSSSQVQPQSN
AASREDSNDAAGPAPQNTATPVDAAASPAPMQENDLGGEDENKMEASTAVTSTAAAAAPN
VAAPTTTTAAAVPAVNGPTSAAPSAAPPLAPSAAAGGSSSQMTSAQPASAQNTAAHSDAS
SAPRPAPPGVSSNPAPLPGPPQAPPASGAAPPSTPLPTPAQAPAPAPAPAQGPPPQQAPG
PGPTPGHGAAPGPLQAPAQAPPAQGQAPPPNPGPAPAPNPAQGPPVAPPPSGPAPTLTNM
ATPHHPQMPQSNAIPGNMIPHSSPMPPVTMPGGPMVPPHPAQMHPSNAIHGNMIPSHPNQ
LPPASSLPGGMPQPHPSQMHPAGALPPGSMAPSHPGQMPPAGAMPGNMAPHPGPGHPSGP
PTSAPPS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgagattccgagctctggtataagggctaggcctgttcctgatgtgtttgct
cctggcctcaggatgtccctgccaccaaattaccggcaggtggccatgatggggaccacc
cctgcccccggacccactcatgtttacatgcctgcgtcaccaatgatgagcaacatttta
aaagccaccacgacctcatcctcctccacctcttcggggaacggaggctcagggagttcg
aaaggccgccctgcagaccgactggcgcgcaccccaagcaccccctcctcctcatccaag
ggggtgggagaggccaacgtccccagccccttcacgaccccacaccatggcaacccagcc
ttcaacccgcagaagatggggactgggaagggggtgagtaagcacagtggagagggaagg
atcccgaaaccccccaaggctccagacaagccactcatgccctacatgcgctactcgcgg
aaggtttgggatcaagtgaaagctgccaataatgatctgaaactctgggagataggcaag
attattgggtctatgtggcgagaccttcccgaagccgacaaacaagactacgtagacgag
tacgagtcggagaagcttgaatatgaaaaggcactgaaaagttatcatgcctctcccagc
tatcaggcgtacttgaatgccaaaacgaaaggtaccctcgtgccaacaggaaccatagcc
acagaagaaaaggagatccttgaccgatcttccagcacagctacagtcggttcaaagctc
gaccggcgcattgacattcaaccagcggaggatgaggatgactatgacgacggcctaagc
gtgaagcacgtgtcgcactcccgttacatccgcaaccaccgtctcatcaacgagattttc
tctgatacgatggtccctgacgtacgctcggttgtcaccagtcagcggctgacggttttg
cgccggcaggtccagtcactcaccatgcatcagaagaaactggagacggaacttcagcag
atcgaagagaagttcgaagccaagaagaggaagttcattgaggcgggggatagcttccag
tcggaactgaagaaggttaaggccacggccccaaagctggacgagacctcgtttgcgtcg
atggttgagcgacagaaagaggtgctgaggcgggaggcagaagagaggcagcgttcagcc
cagggcctcccgtcacgccccccctccacctcctcctcccaggtgcaaccacagagcaac
gcagcatccagggaggatagcaatgacgcagccggccctgcaccccagaacacagccacg
ccggtcgatgctgcggcttcccctgcccccatgcaggaaaacgacttgggtggtgaagac
gagaacaagatggaagcctccactgctgtgacgtctactgctgccgcagctgcaccaaat
gttgcggctcctaccacaaccactgccgctgccgtccctgccgtcaatggccccacctcc
gctgccccctccgctgcccctccccttgccccgtctgctgcggccgggggttcctcctcc
caaatgacctccgctcagcccgcctcagcccagaacacggcagctcacagcgatgcgagc
agcgcccctcggccagcccctccgggcgtctcgtccaatcctgctccgctccctggccct
ccccaggccccccctgcctctggtgcagctcctccttctacacctctcccaacccctgcc
caagcccctgccccagctccagctcctgcccagggaccaccgccgcagcaggccccaggt
cctggtccaacccctggacacggggcagcccccggcccgctccaggctcctgcccaggca
cccccggcccagggccaagcaccgcctcccaaccctggcccggctcctgcacccaaccca
gctcagggtcccccagttgctccccctccctcaggacctgcccctaccctgaccaacatg
gccactcctcaccacccacagatgccccagagcaatgccatcccaggaaacatgattcct
cactccagcccaatgcccccagttaccatgcctgggggacccatggttcccccccacccc
gcccagatgcaccccagcaatgccatccacggcaacatgatcccctctcaccccaaccag
ctgccgcccgccagctccctccccggtggcatgccccaacctcacccatcccagatgcat
cctgccggtgcccttcctcctggcagcatggctccctcccaccctggccaaatgcccccg
gccggtgccatgccaggaaacatggccccacaccctggccctgggcacccatctgggcca
cccacctccgcccccccttcttag
DBGET
integrated database retrieval system
