Penaeus japonicus (kuruma prawn): 122253922
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Entry
122253922 CDS
T07703
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja04120
Ubiquitin mediated proteolysis
pja04137
Mitophagy - animal
pja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122253922
04120 Ubiquitin mediated proteolysis
122253922
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122253922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pja04131
]
122253922
04121 Ubiquitin system [BR:
pja04121
]
122253922
03029 Mitochondrial biogenesis [BR:
pja03029
]
122253922
Enzymes [BR:
pja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122253922
Membrane trafficking [BR:
pja04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122253922
Aggrephagy
Other aggrephagy associated proteins
122253922
Xenophagy
Other xenophagy associated proteins
122253922
Ubiquitin system [BR:
pja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122253922
Mitochondrial biogenesis [BR:
pja03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
122253922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
Rad60-SLD
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
122253922
NCBI-ProteinID:
XP_042873284
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MLSYLLDLLSGIWQSIMALFGFGSPQAAVSNELEVYVRTNTGEKVSVKLDQSWTVSQIKT
TLAPKLQSPADNLRIIFAGKELPDDMVMRQCDLGNHSILHAVRVVSKEEGKAASGPSEVK
DAASTSKTQTNRNEGTEIAQVEKEVEKIQDHGAEVPSTPGHTNAEVEARIEAASPPLPED
SCSMPGPSTSNRSCGRLLCDASTVITIQMTEAEQKSIRDLKSYDGMGERPHFYVYCVVPC
NSVQVGKLRVRCASCKQGALTLHRDPCNWEDVLQPGKINATCETPDCNGTQAEFFFKCRG
HETSGEDDTSVALYLVRANLPAVPCLACTDVSSPVVVFECADAHVMCLDCFVTYCVSRLN
ERQFIQDERLGYTLSCPIGCQDSLIREVHHFKLMGDNNYERYQRWGTEEAVLAAGGVLCP
YPGCGQGIIPDQDCRRVACLNGCGYVFCRLCLQGYHIGDCDPEDGNGPNIVGSSGSFAVD
PSRAAGSRWDEATTLAIRVTTKPCPKCRTPTERDGGCMHMVCTRGSCGFHWCWVCQTEWT
RECMAAHWFG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcttagttatctacttgatctcctgtctgggatatggcagtccattatggccctgttc
ggctttggctcaccacaggctgccgtttcaaatgaactggaggtttacgtcaggacgaat
acgggggaaaaggtgagtgtaaagctagaccagtcatggacggtatcgcagatcaagact
accctggcccccaaacttcagagtccggccgacaacctaagaatcatatttgccggaaaa
gaattgccagatgacatggtaatgcgtcagtgtgacctgggcaatcacagcatcctccat
gcagtccgagtagtttcgaaggaagaaggaaaggccgccagtggaccttctgaagtaaaa
gacgctgcctctacttctaaaactcaaacaaacaggaatgaaggaacagaaattgctcag
gttgagaaagaggttgaaaaaatacaggaccatggagcagaagtgccttcaacacctgga
cacacaaatgctgaagttgaagccagaatagaggcagcgtcaccaccactccctgaagat
tcctgctccatgccagggccctccacatctaacaggtcttgcggaaggctgctctgcgat
gcttcaacagttataaccatacaaatgacagaggcggagcaaaaaagtatcagagaccta
aaaagttatgatggaatgggagagcgacctcacttttacgtctactgtgtagtgccatgc
aactcagttcaagtcggaaagttgcgcgttcgatgtgcatcctgcaagcaaggggctttg
acacttcatcgtgacccttgcaactgggaggatgttcttcaacctgggaagataaatgca
acatgtgagaccccagactgtaacggaactcaggcagaattcttcttcaaatgccgaggt
cacgagaccagtggggaggatgacacttctgtggccttgtacctagtccgtgcgaatctt
cctgctgtgccttgcctggcttgtactgatgtgtcatcacctgttgtggtgtttgaatgc
gcagatgcccacgtcatgtgcctcgactgcttcgtcacttattgtgtgtcgagactaaat
gagaggcagttcatacaagatgagagactaggttatactctgtcgtgtccaataggttgc
caagactccctcatccgggaagtacaccatttcaagctgatgggtgataacaattacgaa
cgttaccagcggtggggaacagaggaggccgtcttggctgctggtggggtcttgtgtccg
taccctggctgtgggcaaggcatcatcccagaccaagattgccgcagggtagcctgcctc
aatggctgcggatacgtgttctgccgcctttgtcttcaaggctatcacataggtgattgt
gaccctgaagatggtaatggcccgaatattgtgggtagctcagggagttttgccgttgac
ccttcgcgtgctgctggttctcggtgggacgaagcaacgacgctcgccatacgcgtcacg
acgaagccgtgccccaagtgtcgcacccccactgagcgagatggcggctgcatgcacatg
gtgtgcacgcgagggtcctgtggtttccattggtgttgggtttgccagacagaatggacc
agagaatgcatggcagctcattggtttggataa
DBGET
integrated database retrieval system
