Paenibacillus sp. JDR-2: Pjdr2_0813
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Entry
Pjdr2_0813 CDS
T00977
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00470
D-Amino acid metabolism
pjd00550
Peptidoglycan biosynthesis
pjd01100
Metabolic pathways
pjd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pjdr2_0813
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pjdr2_0813
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pjdr2_0813
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Pjdr2_0813
Enzymes [BR:
pjd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Pjdr2_0813
Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Precursor biosynthesis
Amino acid ligase
Pjdr2_0813
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
RimK
GARS_A
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ACS99492
LinkDB
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Position
944373..945500
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AA seq
375 aa
AA seq
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MGQKVHLGLIYGGKSGEHDVSLRTAFAVMGELDYAKYEITPFYITRLGEWRVGSMLGGQP
GAIDELRLAPVDGAPVPIVPDLPLAPLLDRLAGGALPGGGQPIDVVFPLLHGTFGEDGTI
QGLLEIADIPYVGAGVLASAAGMDKITMKKIFAYEGLPQCVFRYFNRAQWEKDASFFIME
CEVALGYPCFVKPSNLGSSVGISKAKNRDELIAAIDFAFRFDRRVIVEEFVDAREIEVSV
LGNDDPKISVPGEIAPSNEFYDYKAKYVDGKSTIHIPANIPNKTADAVRDMALRAFLAID
GAGLSRVDFFLRKTDGQLFINEVNTMPGFTPISMYPLMWKESGLPYKDLLDKLIDLAFKR
YADRRTIDYGSSGGN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggggcagaaagtacacttagggttgatttacggagggaagtcgggagagcatgacgtg
tcgctgcggacggcgtttgcggtgatgggggagcttgattacgcaaaatatgaaataacg
cctttttatattaccaggctaggcgaatggagagtgggctcgatgcttggcgggcagccg
ggagcaattgacgagctgcgccttgcgccggtggacggggcaccggtgcctattgtaccg
gatctaccgcttgcccctctcctcgaccgcttagccggcggtgcgctgccaggcgggggg
cagccgatcgatgttgttttcccgctgctccacggtaccttcggagaagacggtacgatt
cagggcctgctcgaaattgcggacatcccttatgtcggggcgggggttctagcctccgct
gcagggatggacaagattacgatgaagaagatattcgcctacgagggtctgccgcaatgc
gtcttccggtatttcaatcgggcgcagtgggagaaggacgcctccttttttattatggaa
tgcgaagtcgccttgggttacccgtgtttcgtaaagccgtccaaccttggatcaagcgtc
ggcatatccaaagctaagaaccgcgacgagctgattgcggccatcgattttgccttccgg
ttcgaccgcagggtaatcgtggaggagttcgtcgatgccagggagatcgaagtcagcgtt
cttggcaatgacgatccgaagatatccgtgcccggggaaattgctccgtccaacgagttt
tacgactacaaggcgaagtatgtggacggcaaatccaccattcatattccggcgaatatt
ccgaacaagacggcggatgcagtccgggatatggcgctgcgggcttttctggcgattgac
ggggcggggctgtcgcgggtagacttcttccttcgcaagacggacggccagctgttcatt
aacgaagtgaacacgatgccgggctttacgccaatcagcatgtacccgcttatgtggaag
gagtcgggcctgccctacaaggatttgctggataagctgatcgacctggcgttcaagcgt
tatgccgatagacggacgattgattacggaagcagcggcggcaactaa
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