Paenibacillus sp. JDR-2: Pjdr2_2197
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Entry
Pjdr2_2197 CDS
T00977
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd03030
DNA replication
pjd03430
Mismatch repair
pjd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pjdr2_2197
03430 Mismatch repair
Pjdr2_2197
03440 Homologous recombination
Pjdr2_2197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pjd03032
]
Pjdr2_2197
03400 DNA repair and recombination proteins [BR:
pjd03400
]
Pjdr2_2197
Enzymes [BR:
pjd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pjdr2_2197
DNA replication proteins [BR:
pjd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pjdr2_2197
DNA repair and recombination proteins [BR:
pjd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pjdr2_2197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ACT00853
LinkDB
All DBs
Position
2582748..2583797
Genome browser
AA seq
349 aa
AA seq
DB search
MEAKEALKEIKAGKFRPAYVIYGKDRYRIGQFTETLTEAMFSPDERELGVVKFDTSETLI
EEAALEAETLPFFVERKLVIVRDSVVFAAGGKEGGKLDHKTDRLQHYLDIPSETTVMLFI
INAEKLDERRKLVKILKDRDALIAFQELDAAELRRWVVKRAEEQKRTMTAEAADLLLVRT
GANMQQLAIEVDKLCLHAGEGGVIGVKETELLTASTVEEDVFALVDAIASLQVDRSLKLY
RALLVRREEPIKIAALIARQLRIMLQIKELEQNRYSPQQMAGQIGLHPYAVKLAAEKSQK
FKVARLGALLSDIADLDYKMKTGAIDKTLGLELFLLSLGVQQGQGQGAR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgaaagaggcgctgaaggaaattaaagcagggaagttccgtcctgcttatgtg
atatacggcaaagaccgctaccggatcggccaatttacggagactttaacggaagcgatg
ttttcgccggacgagcgtgagcttggcgtagtcaagttcgatacgtcggagactctgatc
gaagaagcagcgcttgaagcggagacgctgcctttctttgtggagcgcaagctggttatt
gtccgtgattcggttgtgtttgccgccgggggcaaagaaggcggcaagctggaccataag
acggaccggctgcagcattatttggacatcccgtcggagacaacggttatgctgttcatt
attaatgcggaaaagctggacgagcggcgcaagctggtgaagatactgaaggaccgcgat
gcgcttatcgcttttcaggagctggatgcagccgagcttagacgctgggtagttaaacgc
gcggaggaacagaaacggacgatgacggccgaagcggcggatcttctgctcgtacgcacc
ggggcgaatatgcagcagctggcaattgaagtggacaagctatgcctgcatgcaggtgaa
ggcggggtcattggcgtcaaggagacggagctgctgacggcctctaccgttgaggaggat
gtatttgcgctggtggatgccatagcgagcctgcaggttgaccgttcgctgaagctgtac
cgggccttgctcgtcagaagggaagagccaatcaagattgccgcgttaatcgcaaggcag
ctaagaatcatgcttcagatcaaggaactcgagcagaaccggtattctccgcagcaaatg
gcgggtcagatcggacttcatccgtatgcggttaagcttgccgccgagaaaagccagaag
tttaaagtggcacggcttggcgcgctgcttagcgatatagcggatctggattataaaatg
aaaacaggcgctatcgataaaacattggggttagagttattccttctgtcgcttggggtt
caacaaggtcaagggcaaggcgctagataa
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