Paenibacillus sp. JDR-2: Pjdr2_3105
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Entry
Pjdr2_3105 CDS
T00977
Name
(GenBank) transcriptional regulator, LysR family
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
pjd
Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pjd03000
]
Pjdr2_3105
Transcription factors [BR:
pjd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Pjdr2_3105
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_30
HTH_24
MarR_2
MarR
HTH_8
Motif
Other DBs
NCBI-ProteinID:
ACT01750
LinkDB
All DBs
Position
complement(3559084..3559974)
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AA seq
296 aa
AA seq
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MEIRQLEYFQAICDELHFTRAADKLGITQPTMSYQIKQLEEELGVPLFHRIGKKIALTEA
GFILLNHSRNIFRSIDGAREEISELHHMERGSLTIGTLIGEINDLVSGLLVDFHNKYPGI
SIKLLALEDVVDPLLQDELDFAVTIFPVDDDRFSKVSLYEEEFYFVAHSNSPLSGEPSVT
IEEAMKEPIIMFPKTHRCRQLIDTVCSMHGVAWEPVIETSAIKSILSLVQSGAGASILSK
TLLELYPDQNMIMIPISNPSLRREVGIAYLKDRYIGKATIAFMKQLTTRFDGVKTP
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggagattagacagctggagtattttcaagcgatttgcgatgagcttcattttacccgc
gcggctgataagcttggtattacgcagccaacgatgagttatcaaataaaacagttggag
gaagagctgggggtaccgttatttcatcggatcgggaaaaaaatcgcgcttacggaagcg
ggttttatccttcttaaccatagccgcaacattttccgctcgatagacggagcacgcgag
gaaatttccgaacttcatcatatggagcgcggatcgttaacgattgggactttaatcggg
gagattaatgatctcgtttctggtttgctggttgattttcacaataaatatccggggata
agcattaaactattggcattggaggatgtggtggatccccttctgcaggatgagcttgat
tttgcggtaaccatctttccggtagatgacgacagattcagtaaagtttctttgtacgag
gaagaattttatttcgtagcccattccaattccccgttatccggtgagcctagcgttacc
atagaagaagcgatgaaagagcccatcattatgttccccaaaacccaccgttgccggcag
ttgattgacacggtgtgcagcatgcatggcgttgcttgggagcccgtcatagagacttcg
gccatcaagtcgattctctccctcgtgcagtctggtgccggagcttccattctatctaaa
acgctgctcgaattgtatccggatcagaatatgatcatgattccgataagcaacccttca
cttcgcagggaagtcggtattgcttatctgaaggaccgctatataggaaaagcaaccatt
gcgttcatgaagcagctgactacccgctttgacggggtcaaaactccttga
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