Paenibacillus sp. JDR-2: Pjdr2_5609
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Entry
Pjdr2_5609 CDS
T00977
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00470
D-Amino acid metabolism
pjd00550
Peptidoglycan biosynthesis
pjd01100
Metabolic pathways
pjd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pjdr2_5609
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pjdr2_5609
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pjdr2_5609
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Pjdr2_5609
Enzymes [BR:
pjd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Pjdr2_5609
Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Precursor biosynthesis
Amino acid ligase
Pjdr2_5609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
RimK
GARS_A
ATP-grasp_4
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ACT04217
LinkDB
All DBs
Position
6433306..6434385
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AA seq
359 aa
AA seq
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MRTKLYVLYGGKSVEHEVSLKTAVTVLQSINESRYEAYPVYLTREGLWCTPPGPIAKDEL
TIERLIATPTFPDPARSIGEILSGIMALPGPKVVLPLLHGPNGEDGTVQGLLELVNVPYV
GNGVLSAALTLDKAMSKQVLAQAGINQTEYRVYRYEEWITDEESVLRKAEDSIEYPCYVK
PASLGSSIGISRCTNRGELLAGIREAFSYDKKLVIEREVSGREIQVAVIGNERPLASLPG
EFIHDHIFFDYESKYMDKRLTMQIPANLADGLTPRIRELAVRAYQAHGCEGLARVDFFLD
GEGQLYLNEINALPGFTNFSMYPVMWERTNGTTYSELIEQLIGHAIARHQNKQTIQYTK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaagttatacgtgctatacggcggtaaatccgtcgaacatgaagtgtcgtta
aaaacagccgtaaccgtccttcaatccattaatgagagccgctacgaggcttatcccgtc
taccttacacgcgaaggcttgtggtgtacgccgcccgggcctattgccaaggatgagctc
acgattgaacggttaattgcaacgccaacttttccggaccccgcccgttccatcggcgag
atcctgtccggcatcatggcgctgcccggcccaaaagtcgttttgccgctcctgcatggt
cccaacggagaagacggtacggtacaaggcctgctggagctcgtgaacgttccttatgtg
gggaatggcgtgctatcggctgcgttaaccttggacaaggccatgtcgaagcaggtgctg
gcccaagccggcattaaccagacggaatatagggtgtaccgctacgaggaatggataacc
gatgaggaatccgtattgcgcaaggcggaggattccattgaatatccgtgctacgtgaag
ccagcctctcttggctccagtatcggcatcagccggtgcacgaaccgcggagagctcctc
gccggtattcgcgaagctttctcttacgataaaaagctcgtcatcgagcgtgaggtgagc
ggcagagaaattcaagtcgccgtcatcggcaatgagaggcctcttgcctcgctgcccggc
gaattcatccatgaccatattttcttcgattacgaatccaaatacatggacaagcggctt
accatgcaaattcccgccaatctggcggacggcctcactccgcgaatccgcgagctggcg
gtccgcgcctatcaagcccatggctgcgagggccttgcccgcgttgacttcttccttgac
ggagaaggccaattgtatctgaacgagataaacgcccttcccggttttacgaatttcagt
atgtacccggtcatgtgggaacgcacgaacggaacgacctattccgaactgatcgaacaa
ttaatcggacatgccatcgcccgtcaccaaaacaaacaaacgattcaatatacaaaataa
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