Pantoea jilinensis: KTJ90_03940
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Entry
KTJ90_03940 CDS
T08640
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pji
Pantoea jilinensis
Pathway
pji03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KTJ90_03940 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pji03400
]
KTJ90_03940 (recB)
Enzymes [BR:
pji01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KTJ90_03940 (recB)
DNA repair and recombination proteins [BR:
pji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KTJ90_03940 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QXG55315
LinkDB
All DBs
Position
827645..831184
Genome browser
AA seq
1179 aa
AA seq
DB search
MTQLPPVSLNPLTLPLRGERLIEASAGTGKTFTIGLLYLRLLLGLGGENAYSRPLSVEEI
LVVTFTEAATAELRGRIRENIHQLRLACIRGESRNPMHQLLLAQMPDLSQAAAQLLAAER
QMDEAAIFTIHGFCQRMLNLNAFESGMLFEQELIEDEQALLKQSTADFWRRQCYPLSLDV
ARIIAAEWSGPDSLLTTLRPWLQGESPVLKRPPAADEDLASRHARNLARINAMKQQWQAL
SADVEGMISASGVDKRSYSSKHLPNWVARVTQWASSETRDYQLPKELARFGQQVLDEKTK
KGEAPRHSLFEAVDQFLAEPLSLRDVIIAQALTDVRATVQREKRLRALLGFDDLLSKLDE
ALQQPGGVLLAETIRARFPVALIDEFQDTDPQQYRIFRTLYINQPEQALFLIGDPKQAIY
AFRGADIFTYLRARNEVSAHYTLDTNWRSSPEMVESVNRLFSQIDSPFLFSAIPFQPVMP
AAPNQSLKLIFDEQQQPALRFWLQPGEGVGNSDYQQFMAQQCAADISRWLVAGQQGRACL
GKGDALQPVRASDITVLVRSRNEAGLIRDALNALSIPSVYLSSRDSVYTTPEARELLWLL
QAIQAPEQERLLRSALATSIFAIDAATLDALTQNEREWDALVEQFAVWQQLWHQRGVLPM
LRDVMIKRQLAENMLASENGERRLTDLMHLGELLQEASVQLESPHALVRFLAQQIARPNS
QAASQQLRLESDRHLVQIVTIHKSKGLQYPLVWLPFAAGFREAASALYHDRDNFMALLDV
QGDAQSLALAEEERLAEDLRLLYVALTRSIYHCSVGIAPLIKGTRKKEGESDLHKSALGY
LVQQGEAADAQQLSQKLNALTGEGIALVEADLMPGERWQDAEQGDEVLSSRDVTRALADA
WRVTSYSGLQQHHSSSLLDALPNFDIDAAGEDESGEEAALTPHHFPRGAAPGTFLHGLFE
SIDFTELPDRVWLEDQLQHNGYPSDWLPVLEQWIERVLHTPLNAEGLTLSAIKSSERLIE
MEFYLPINNLLTAADLDDLLRQHDSLSLQAAPLDFRQVRGMLKGFIDLVFRWQGKYYLLD
YKSNWLGDSHAAYTPEAMAQAMIGHRYDLQYQLYTLALHRYLQHRLPDYHYEQHFGGVFY
LFLRGMDGSSPDNGIFATRPGEAFVEAIDALFGETGEVL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagttaccgcccgtatcgctgaatcccttaacgctgccgctcagaggcgagcgg
ctgattgaggcatcagcaggcaccggaaaaacctttaccattggtctgctctatctgcgc
ctgctgctggggctgggcggcgaaaacgcgtatagccggccactctcggtagaagaaatt
ttagtggtgaccttcaccgaggccgcgacggcggagttacgcggccgcatccgcgaaaat
attcatcagctgcggctggcctgtattcgcggcgaaagccgcaatccgatgcaccagttg
ctgctggcgcagatgcccgatctgagtcaggccgctgcgcagctgctggcggccgaacgc
cagatggatgaagccgccatcttcaccattcacggcttctgtcagcgaatgctgaatctc
aacgcgtttgaatcgggcatgctattcgagcaggagttgatagaagatgaacaggcactg
ctcaagcagtccactgccgatttctggcggcgtcagtgctatccactcagtctggatgtg
gcacggattatcgccgcagagtggagcggacccgacagcctgctgacgacactgcgcccc
tggctacagggtgagtcgccagtgctcaaacggccgcccgctgccgatgaggatctggcg
tcacgtcacgcccgcaatctggcgcgcatcaacgccatgaagcagcagtggcaggcgctg
agcgccgatgttgaagggatgatcagcgcatctggcgttgataagcgtagctatagcagt
aaacacctgcccaactgggtcgcccgcgtcacgcagtgggccagcagcgaaacgcgtgat
tatcagttgcctaaagagctggcgcgttttggacagcaggtgcttgatgagaaaacgaaa
aagggtgaagcaccgcgccattcgctgtttgaggctgttgatcagtttctggcagaaccg
ctgtcgctgcgggatgtgatcattgcgcaggcgctgaccgatgtacgagccacagttcag
cgcgagaaacggttacgtgcgctgttaggtttcgatgacctgctcagtaagctggatgaa
gcgttgcagcagccgggcggcgtgttgctggctgaaactatccgggcgcgtttcccggtg
gcactgattgatgaatttcaggataccgatccacagcagtatcgcatcttccgtacgctc
tacattaatcagccagaacaggcgctgtttctgatcggtgaccccaagcaggccatctat
gcgtttcgcggtgcggatatttttacctacttgcgggccagaaacgaagtcagtgctcac
tacacacttgatactaactggcgttcttcacctgagatggtcgagagcgtcaatcgcctc
ttttctcagatcgattcgccttttctgttttcggcgatcccctttcagccggtaatgccc
gctgcgcccaaccagtcactgaagctgatttttgacgagcagcagcaaccggcgttacgg
ttctggctgcagcccggtgagggcgtcggcaacagcgattaccagcagtttatggcgcaa
cagtgtgcggcagatatcagccgctggctggtggccggacagcagggacgtgcctgcctg
ggcaaaggcgacgcgctacagccagtgcgggcttctgatattaccgtgctggtgcgcagt
cgcaatgaggccggtttgatccgcgacgcgctgaatgcgttgtcaattccctcggtctat
ctctccagccgggacagcgtttacaccacgccggaagcgcgcgaattactctggttactt
caggcgattcaggctcctgaacaggaacggctgctgcgtagcgcactggccacctctatt
tttgctattgatgccgcgacgctggatgcgctgacgcagaatgaacgcgagtgggatgcg
ctggtggagcagtttgccgtctggcagcagttgtggcaccagcgcggcgtgttaccgatg
ctgcgtgatgtcatgatcaagcggcagctggcggaaaatatgctggcctcggagaacggg
gaacgtcgcctgacggacctgatgcatctgggtgaactgctgcaggaagcctcagtacag
ctggagagtcctcacgctctggtgcgttttctggcgcagcagattgcccgaccaaacagc
caggccgccagccagcagctgcgtctggaaagcgaccgccatctggtgcaaatcgtcacc
atccacaaatcgaaagggctgcagtatcccctggtatggctgccgtttgctgccggattc
cgcgaggcggccagcgcgctttatcacgatcgtgacaacttcatggcgctgcttgatgtg
cagggcgatgcacagagtctggcgttagccgaagaggagcgtctggcggaagatttgcgt
ctgctctatgtggcgctgacccgctcgatctatcactgcagcgtcggcattgcaccgctg
attaaaggcacgcgaaaaaaagagggcgaaagcgatctgcacaaaagcgcgctcgggtat
ctggtgcagcagggtgaggcggcggatgcgcagcagctcagccagaaactgaatgcgcta
accggtgaggggattgcgctggttgaagccgatctgatgccgggagaaaggtggcaggac
gctgagcagggcgatgaggtattgagcagtcgcgacgtgacccgcgcactggcggatgcc
tggcgggtcaccagctattccggcctgcaacagcatcacagctcgtcacttcttgatgca
ttgccaaacttcgatattgatgcggcgggcgaggacgagagtggtgaagaggctgcattg
acaccgcaccattttccgcgcggtgcggcgccgggcaccttcctgcacggtttgtttgag
tcgatcgactttaccgaactgccggatcgcgtctggctggaggatcagctgcagcataat
ggctatccgtcagactggttaccggtcctggaacagtggattgagcgggtattgcatacg
ccgcttaacgcggaagggctgacgctatcggcaattaaaagcagcgaacgactgatcgaa
atggagttctatttgccgatcaacaatctgctgacggcggccgatcttgacgatctgctg
cgccagcacgacagcctctctctgcaggccgccccgctggattttcgtcaggtgcgcggc
atgctcaaggggtttatcgatctggttttccgctggcagggaaaatattatctgctcgat
tacaaatcgaactggctgggcgatagccatgccgcttacacacccgaggcgatggcgcag
gccatgatcggccaccgttatgatctgcagtatcagctctatacgctggcgctgcatcgc
tatctgcaacatcgcctgccggactaccactatgagcaacattttggcggcgtcttttat
ctgtttttacgcgggatggacggcagctcgccggacaacggcatttttgccacccgacct
ggcgaagcctttgtggaagcgatcgatgcactgtttggtgaaaccggagaggtgttatga
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