Parabacteroides johnsonii: LK449_18255
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Entry
LK449_18255 CDS
T07907
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00470
D-Amino acid metabolism
pjo00550
Peptidoglycan biosynthesis
pjo01100
Metabolic pathways
pjo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LK449_18255
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LK449_18255
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LK449_18255
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pjo01011
]
LK449_18255
Enzymes [BR:
pjo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LK449_18255
Peptidoglycan biosynthesis and degradation proteins [BR:
pjo01011
]
Precursor biosynthesis
Amino acid ligase
LK449_18255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
CPSase_L_D2
GARS_A
Cro
ATPgrasp_ST
TTL
Motif
Other DBs
NCBI-ProteinID:
UEA92528
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All DBs
Position
4457401..4458378
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AA seq
325 aa
AA seq
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MKRNIAIVAGGDSSEIVISLKSAEGIFSFLDKDKYNVYIAIIKRDEWAVKLPGGEHTPID
KNDFSFRENGEVRHFDFAYITIHGTPGEDGRLQGYFDMIGMPYSSCGMFVSALTFNKFAC
NHYLKGFGVDIACSIHLFKGQTVTDEEVVSRLGLPVFVKPNDGGSSFGVTKVKEASAIQP
AIAKAFSEGREVVIESFIDGTEVTCGCYKTADKEVVFPLTEVVTDNEFFDFDAKYNGQVQ
EITPARVSAELTEKVQRETSRIYDILGAKGLIRVDYIIPAGGEPKLLEVNTTPGMTATSF
IPQQVRAAGLEMKDVMTDIIENEFN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaacattgctattgttgccggaggcgattcctccgaaatcgttatttcatta
aaaagtgcggaaggaatcttctcttttcttgataaagataaatataatgtatatattgcc
atcataaaaagagatgaatgggcggtaaaacttcccggcggggaacacacaccaatagat
aagaatgattttagtttccgtgagaatggcgaggtcagacattttgattttgcctatatt
acgatccacggtactccgggagaagacggacgtctgcaaggatatttcgatatgatcgga
atgccgtattcctcttgtggaatgtttgtaagcgcacttacattcaacaagtttgcttgc
aatcattatctgaaaggattcggtgtcgacatcgcctgctccatacatttgtttaaagga
cagactgtgacagatgaagaagtggtcagccgtctggggcttccggtatttgtgaagccg
aacgacggtggcagtagcttcggggtgacgaaagtgaaagaggcttcggctatccagccg
gcgatcgccaaagctttcagcgaaggcagggaagtggtcatagaaagttttatcgatggg
acggaggtgacatgtggttgctataagactgctgataaggaggtggtattcccgctcacc
gaagtcgttacggataacgagttcttcgatttcgatgccaagtataacggacaggtacag
gaaattacgcccgcccgtgtttctgccgaactgacggaaaaggtgcaacgcgagacttcg
aggatttacgacatattgggggcgaaaggtttgatccgtgtggattatatcatcccggcg
ggcggcgagccgaaattgctcgaagtcaatacgactcccggtatgacagcaaccagtttt
atcccgcagcaggtgcgggcagccggtctggagatgaaagatgtaatgacagatattata
gaaaacgagtttaactaa
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