KEGG   Pseudomonas juntendi: L1P09_08405
Entry
L1P09_08405       CDS       T08267                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
pju  Pseudomonas juntendi
Brite
KEGG Orthology (KO) [BR:pju00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pju02044]
    L1P09_08405 (traD)
Secretion system [BR:pju02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   L1P09_08405 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 TniB
Other DBs
NCBI-ProteinID: UJM14195
LinkDB
Position
complement(1818837..1821029)
AA seq 730 aa
MSGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPSMGVGSALAFGAYGAIRYR
DARVILRYRRNIRRLPRYVMTSKDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYV
EPTPAYRLARRLEERLEFAPFPLSRLPALTGWDVPFNPVRPLPPVGGLPRLHGIEPEEVD
VSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRVNAAGEHEVVIVIDPKGDADLLKR
MYVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREF
AWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAK
LNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLE
KLTSGKIAQLLAPNYSDLADPRPIFDWMQVIRKRAIVYVGLDALSDAEVAAAVGNSMFSD
LVSVAGHIYKHGIDDGLPGASAGARVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAY
TQTLSDIEARIGNRAKAGQVIGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGAT
DSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVGLPKGQCFALLQGGQLWKVRMPLPAPD
PDEVMPADLQQLAGYMRQSYSEATQWWEFTSSPALQDTGLPDDLLDDATAAEPAVVAIAT
DEDTGNEASP
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgtcggggaaacagccggtcgaggtattgctacgcccagcggtggagctatacaccgtt
gccgcatgcgcgggcgccgcgtttctgtccctggtggccccatggtcgctcgcgctgagc
ccgtccatgggcgtcggcagtgccctggcgttcggggcctacggcgcgatccgctaccgc
gatgcccgcgtcatcctgcgctaccggcgcaacatccgccgcctacctcggtacgtgatg
accagcaaggacgtgccggtcagccagcagcggctgttcgtggggcgcggcttcctgtgg
gagcagaagcacacccataggctgatgcagacgtaccggccggagttccgccgctacgtc
gagccgacgccggcctaccggctggcgcgtcgcctggaagagcggctggagttcgcgccg
ttcccgctgtcccggctgcctgcgctcaccggctgggacgtgcctttcaacccggtgcgg
ccgctgccgccggttgggggcctgccgcgcttgcacggcatcgaacccgaggaggtggac
gtcagcctgccactcggcgagcgcgtcgggcactccctggtgctgggcaccacgcgcgtc
ggcaagacccgcctggccgagttgttcgtgacccaggacatccggcgcgtgaacgccgct
ggcgagcacgaggtcgtgatcgtcatcgaccccaagggcgacgccgatctcctgaagcgg
atgtacgtcgaggccaagcgcgcgggccgcgaaggcgagttctacgtctttcatttgggc
tggccggacatttccgcgcgctacaacgccgtgggccgcttcggccggatcagcgaggtg
gccacccgcgtcgcggggcagctttccggcgaaggcaacagcgcggcgttccgcgagttc
gcctggcgcttcgtcaacatcattgcgcgcgcgttggtggaactgggacagcgcccggac
tacatgctgatccagcggcacgtcatcaacatcgacgcgctgttcatcgagtacgcccag
cactacttcgccaagacggagcccaaggcctgggaggtgatcgtccagattgaggccaag
ctcaacgagaagaacatcccgcgcaacatgatcgggcgcgagaagcgcgtggtggcgctg
gagcagtacctctcgcaggcgcgcaactacgacccggtgctggacggcctgcgctctgcc
gtccgctacgacaagacgtacttcgacaagatcgtcgcatcgctgctgccgctgctggag
aagctcaccagcggcaagatcgcgcagcttctggccccgaactactccgacctggccgac
ccgcgcccgatctttgattggatgcaggtcatccgtaagagggccatcgtctatgtgggc
ctggacgcgctctccgatgccgaggtcgccgcagcggtcggcaactcgatgttcagcgat
ctcgtgtcggtcgccgggcacatctacaagcacgggatcgacgatggactgccgggcgca
tcggccggtgcgcgcgtgccgatcaatgtccatgccgacgaattcaacgagttgatgggt
gacgagttcatcccgttgatcaacaagggtggcggtgccggcctgcaagtcactgcgtac
acgcagaccctttcggacatcgaggcccgcatcggcaaccgcgcgaaggcgggccaggtg
atcggcaacttcaacaacttgttcatgctgcgcgtgcgcgagacagcgaccgccgaactg
ctgacccggcaattgccgaaggtcgaggtctatacgaccaccatcgtcagcggtgcgacc
gacagctcggacattcgcggggcgacggatttcacgtcgaacacgcaggaccgcatcagc
atgtccagcgtgccgatgatcgagccgtcacacgtcgtcggcctgccgaaaggccagtgc
ttcgcgctgctgcagggcggccagctttggaaagtgcgcatgccgctgccggcgccggac
ccggacgaagtgatgccggcagacttgcagcaactggccgggtacatgcgccagagctac
agcgaagcgacgcagtggtgggagttcaccagttcccccgccttgcaggacaccggcctg
cccgacgacctgctggatgacgccactgcggccgaacctgccgtggtggctattgccacc
gacgaggacaccggcaacgaggcctcgccatga

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