Paenibacillus kribbensis: B4V02_23325 Help Entry B4V02_23325       CDS       T05249                                  Name (GenBank) DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism pkb  Paenibacillus kribbensis Pathway pkb03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:pkb00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     B4V02_23325  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pkb03400]     B4V02_23325 Enzymes [BR:pkb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      B4V02_23325 DNA repair and recombination proteins [BR:pkb03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      B4V02_23325 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme TMEM101 Motif Other DBs NCBI-ProteinID:  ASR49401 UniProt:  A0A222WUG7 LinkDB All DBs Position 5218022..5218984 Genome browser AA seq 320 aa AA seqDB search MHSEMKPVIPFEPEQSEEIPVDKNLWRYEIKWDGTRILTYHDHGSTRLFNRKQHERTPLY PELAPFSSYCRADSVILDGEMIALGADGKPSFHEIMRRDLIRRTDRIQAAYRAVPATYML FDIVYLNGEWVHRRSLQERLDLLQQIIIPNERIQLAPAHPDGQALFQVMCSQGMEGIVCK RLDSSYTLGGQDGRWIKVKNYGDLIAIIGGYTLNGGVINAVLLGQYDKQGKLRYIGHAGT GKLTREDWRQLTERLMPHTISERPFVNKPDRHQDAIWVQPMYTAKVQYSEWRWQEGRTLR QPSIQAFVNQNIEQCIGPWI NT seq 963 nt NT seq  +upstreamnt  +downstreamnt ttgcattcggaaatgaagcctgtcatcccgtttgaacccgagcaaagtgaagaaattcct gtagataaaaatctttggcgttacgaaataaaatgggacggcacgagaattttgacgtat cacgaccatggcagcacgcgtctgttcaaccgcaagcagcatgaacgaacgcctttgtac ccggagctggctcccttttcctcctactgtcgggcagactcggtcatactggacggggaa atgatcgcactcggtgccgatggcaagccatcattccatgaaatcatgcgacgcgatctg attcgccgaacggatcggattcaagcagcctatagagctgtgcccgccacctatatgctg tttgatattgtttatctgaacggggagtgggttcatcgcagatcgttgcaagaaaggctt gatctgctgcagcagatcataataccaaatgaacggatccaactggctcctgcccatcct gacggacaagcgctattccaggtcatgtgcagccaaggtatggagggcatcgtatgtaaa aggttggacagctcatacacattgggtgggcaggacggacgatggatcaaggtcaaaaat tatggcgatctcattgccatcatcggaggctataccctaaacggtggcgttattaatgct gtactgctgggtcagtatgataagcagggaaagctgcgatacattggacatgcaggtacg ggcaagctgactcgggaagattggcgtcagcttaccgagcgcctcatgccacatacgatt tcggagcgaccttttgtcaataaaccggatcgtcatcaagacgcaatttgggtgcagccc atgtataccgccaaggttcaatatagtgagtggcgatggcaggaaggacgcacccttcgc cagccctccatacaagcctttgtcaatcagaacattgaacagtgcatcggcccttggata tga

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