Pseudomonas knackmussii: PKB_1815
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Entry
PKB_1815 CDS
T03081
Symbol
himA
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkc03032
]
PKB_1815 (himA)
03036 Chromosome and associated proteins [BR:
pkc03036
]
PKB_1815 (himA)
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_1815 (himA)
DNA replication proteins [BR:
pkc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PKB_1815 (himA)
Chromosome and associated proteins [BR:
pkc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PKB_1815 (himA)
DNA repair and recombination proteins [BR:
pkc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PKB_1815 (himA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HrcA
Meth_synt_1
Motif
Other DBs
NCBI-ProteinID:
CDF83172
UniProt:
A0A024HFA3
LinkDB
All DBs
Position
1864134..1864436
Genome browser
AA seq
100 aa
AA seq
DB search
MGALTKAEIAERLYEELGLNKREAKELVELFFEEIRQALEHNEQVKLSGFGNFDLRDKRQ
RPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTKS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctgacgaaagctgagattgccgaacgtctgtatgaagagctgggcctgaat
aaacgggaagccaaggaactggtggagctcttcttcgaagagatccgccaggcgctggag
cataacgaacaggtgaaactgtccggtttcggcaattttgacctgcgcgacaaacgccag
cgccctgggcgcaaccccaagaccggggaagagatcccgatcacggctcgccgcgtcgtc
acctttcgtccaggccagaaactaaaagccagggttgaggcttatgctggaaccaagtca
taa
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