Pseudomonas knackmussii: PKB_2040
Help
Entry
PKB_2040 CDS
T03081
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00020
Citrate cycle (TCA cycle)
pkc00190
Oxidative phosphorylation
pkc00650
Butanoate metabolism
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01120
Microbial metabolism in diverse environments
pkc01200
Carbon metabolism
Module
pkc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pkc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pkc_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PKB_2040 (sdhA)
00650 Butanoate metabolism
PKB_2040 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PKB_2040 (sdhA)
Enzymes [BR:
pkc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PKB_2040 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
GIDA
HI0933_like
FAD_binding_3
Thi4
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
CDF83387
UniProt:
A0A024HFV9
LinkDB
All DBs
Position
2102989..2104764
Genome browser
AA seq
591 aa
AA seq
DB search
MASNRTLSFDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRP
FGGQSKGPDNPSVQAARTCAAADRTGHALLHTLYQANLKAGSSFLNEWYAVDLVKNQDGH
VVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDI
EMWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKE
VIAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPIPVIPTCHYMM
GGVATNIHGQALTMDANGNDQIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRATGL
HLEKALKEGIEHRGASESDLEASYKRLNGVNERTSGEEVAPLKRELQQCMQNYFGVFRTG
EYMQKGITQLADLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESR
GAHAREDFEERDDENWLCHTLYFPGEKRVAKRAVNFAPKTVPAFEPKVRTY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaatcgtactctctccttcgacgccatcatcgttggtggtggcggcgccggc
atgcgcgctgcgctgcaactggcccagggtggtcacaagactgccgtggtaaccaaggtc
ttcccgactcgttcgcacactgtgtccgcccagggcggcatcacctgtgccatcgcctcg
gccgacccgaacgacgattggcgctggcacatgtacgacaccgtcaagggctccgactac
atcggtgaccaggacgccatcgaatacatgtgctccgttggcccggaagccgtgttcgag
ctggaacacatggggctgccgttctcccgtaccgagcaaggccgcatctatcagcgtccg
ttcggtggtcagtccaaaggcccggacaatccgtccgttcaggctgctcgtacctgcgct
gctgccgaccgtaccggtcacgcgctgctgcacaccctgtaccaggccaacctgaaagcc
ggctcctcgttccttaatgagtggtacgccgtcgacctggtgaagaaccaggacggtcac
gtggttggcatcatcgccatctgcatcgagaccggcgaaaccgtttacatccgctccaaa
gccgtggtcctggccactggcggtgctggccgtatctacgcctccaccaccaacgccctg
atcaacaccggcgacggcgtgggcatggctctgcgcgctggtgtgccggtgcaggacatc
gaaatgtggcagttccacccgaccggcatcgccggcgctggtgtactggtcaccgaaggc
tgccgcggcgaaggtggttacctgatcaacgcccacggcgagcgcttcatggagcgttac
gctccgaacgcaaaagacctggccggccgcgacgtagttgcccgctccatggtcaaggaa
gtcatcgccggcaacggcgtgggcccgaacaaggaccacgtactgctgaagctcgaccac
ctgggtgaagaagttctgcacagccgcctgcctggcatttgcgaactgtccaagaccttc
gctcacgtcgacccggtcgtcgcgccgatcccggttatcccgacctgccactacatgatg
ggcggcgttgccaccaacattcatggccaggccctgaccatggacgccaacggcaacgac
cagatcgtcgaaggtctgttcgcagtcggcgaagtagcttgcgtatcggtacacggtgcc
aaccgtctgggcggcaactcgctgctggacctggtggtcttcggtcgtgcgactggtctg
cacctggaaaaggccctgaaagagggcatcgagcaccgtggcgcttccgagagcgacctg
gaagcctcctacaagcgcctgaacggcgtgaacgagcgcaccagcggcgaagaagtcgcc
ccgctcaagcgcgaactgcagcagtgcatgcagaattacttcggtgtattccgtaccggc
gaatacatgcagaagggcatcactcaactggctgatctgcgcgagcgcattgcgaacgtc
aagatcaacgacaagagccaggctttcaacaccgcgcgcatcgaagcgctggaactgcag
aacctcctcgaagtggccgaagccactgccattgcggccgaagcccgcaaagagtcccgc
ggcgcgcatgcccgcgaagacttcgaggagcgcgacgacgagaactggctgtgccacacc
ctgtacttcccgggtgagaagcgcgtagccaagcgtgccgtcaacttcgcgccgaagact
gttccggcattcgaacccaaggttcgtacttactaa
DBGET
integrated database retrieval system