KEGG   Pseudomonas knackmussii: PKB_2044
Entry
PKB_2044          CDS       T03081                                 
Symbol
lpdG
Name
(GenBank) Dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pkc  Pseudomonas knackmussii
Pathway
pkc00010  Glycolysis / Gluconeogenesis
pkc00020  Citrate cycle (TCA cycle)
pkc00260  Glycine, serine and threonine metabolism
pkc00280  Valine, leucine and isoleucine degradation
pkc00310  Lysine degradation
pkc00380  Tryptophan metabolism
pkc00620  Pyruvate metabolism
pkc00630  Glyoxylate and dicarboxylate metabolism
pkc00640  Propanoate metabolism
pkc00785  Lipoic acid metabolism
pkc01100  Metabolic pathways
pkc01110  Biosynthesis of secondary metabolites
pkc01120  Microbial metabolism in diverse environments
pkc01200  Carbon metabolism
pkc01210  2-Oxocarboxylic acid metabolism
pkc01240  Biosynthesis of cofactors
Module
pkc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pkc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pkc_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pkc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pkc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PKB_2044 (lpdG)
   00020 Citrate cycle (TCA cycle)
    PKB_2044 (lpdG)
   00620 Pyruvate metabolism
    PKB_2044 (lpdG)
   00630 Glyoxylate and dicarboxylate metabolism
    PKB_2044 (lpdG)
   00640 Propanoate metabolism
    PKB_2044 (lpdG)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PKB_2044 (lpdG)
   00280 Valine, leucine and isoleucine degradation
    PKB_2044 (lpdG)
   00310 Lysine degradation
    PKB_2044 (lpdG)
   00380 Tryptophan metabolism
    PKB_2044 (lpdG)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PKB_2044 (lpdG)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pkc04147]
    PKB_2044 (lpdG)
Enzymes [BR:pkc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PKB_2044 (lpdG)
Exosome [BR:pkc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PKB_2044 (lpdG)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA FAD_oxidored DAO HI0933_like AlaDh_PNT_C NAD_binding_8 FAD_binding_3 Thi4 3HCDH_N 2-Hacid_dh_C Amino_oxidase Lycopene_cycl UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: CDF83391
UniProt: A0A024HEU8
LinkDB
Position
2109918..2111354
AA seq 478 aa
MSQKFDVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKAL
LDSSWKYKEAKESFNVHGISTGEVKMDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG
HGKLLANKQVEVTGLDGTVQVLEADNVIIASGSKPVEIPPAPLTEDIIVDSTGALEFQAV
PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQVAKEALKTLSKQGLNIR
LGARVTGSEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF
IFVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQQLKGEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagccagaaattcgacgtggttgtgattggtgctggccccggcggctacgtagctgcc
atccgtgccgcacaactcggcctgaagaccgcttgcatcgagaagtacatcggcaaggag
ggcaaggtcgccctcggcggtacctgcctgaacgtaggctgcattccgtccaaggcgctg
ctggacagctcctggaagtacaaggaagccaaagagagcttcaacgtccacggtatctcc
actggcgaagtgaagatggacgttcccgcgatggttgcccgcaaggccaacatcgttaag
aacctgacgggcggcatcgccaccctgttcaaggccaacggcgtcacctccttcgaaggc
cacggcaagctgctggccaacaagcaggtcgaagtcaccggtctggacggcaccgttcag
gtcctggaagccgacaacgtgatcatcgcctccggttccaagccggtcgaaatcccgccg
gccccgctgaccgaagacatcatcgtcgactccaccggcgccctggaattccaggccgtg
ccgaagaagcttggcgtgattggcgctggcgtcatcggcctggagctgggctcggtctgg
gcccgcctgggtgccgaagtcaccgtcctggaagccctggacaagttcctgccggctgcc
gacgagcaggtcgccaaggaagcgctgaagaccctgagcaagcaaggtctgaacatccgc
ctgggcgctcgcgtcaccggttcggaagtgaagaagaagcaagtcaccgtgaccttcacc
gacgccaacggcgagcagaaggaaaccttcgacaagctgatcgttgcggtcggccgtcgt
ccggttaccaccgacctgctggctgccgacagcggcgtgaccctggacgagcgtggcttc
atcttcgtcgacgaccactgcaagaccagcgttccgggcgtcttcgccatcggtgacgtg
gtccgcggcgccatgctggcgcacaaggcctcggaagagggcgtgatggttgccgagcgc
atcgccggccacaaggcccagatgaactacgacctgatcccgtcggtcatctacacccac
ccggaaatcgcgtgggtcggcaaaaccgagcagcagctcaagggcgaaggcgtcgaagtc
aacgtcggcactttcccgttcgctgccagcggccgcgccatggctgccaacgacaccacc
ggcctggtcaaggtcatcgccgatgccaagaccgaccgcgtgctgggcgtccatgtgatc
ggcccgagcgccgccgagctggttcagcaaggcgcgatcgccatggaattcggcaccagc
gccgaagacctgggcatgatggtcttctcccacccgactctgtccgaagcgctgcacgaa
gcggccctggcggtgaatggccacgccatccacatcgccaatcgcaagaagcgctaa

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