Pseudomonas knackmussii: PKB_2121
Help
Entry
PKB_2121 CDS
T03081
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc03030
DNA replication
pkc03430
Mismatch repair
pkc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKB_2121 (dnaX)
03430 Mismatch repair
PKB_2121 (dnaX)
03440 Homologous recombination
PKB_2121 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkc03032
]
PKB_2121 (dnaX)
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_2121 (dnaX)
Enzymes [BR:
pkc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PKB_2121 (dnaX)
DNA replication proteins [BR:
pkc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PKB_2121 (dnaX)
DNA repair and recombination proteins [BR:
pkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PKB_2121 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_18
AAA_14
AAA_30
AAA_19
AAA_2
nSTAND3
PIF1
TsaE
DUF3646
AAA_7
Rad17
AAA_24
SKI
zf-CXXC
HasA
Herpes_Helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CDF83468
UniProt:
A0A024HG76
LinkDB
All DBs
Position
2197728..2199857
Genome browser
AA seq
709 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARILAK
CLNCETGISSTPCGQCSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY
KVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKNMPP
ERVVEHLTHVLGAENVPFEEDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGTLDHGQVYGVLHALLEGDARALLDAVRHLAEQGPDWTGVLAEILNVLHRVAIAQVLPD
AVDNGQGDRDKVLALAQALPGEDVQFYYQMGLIGRRDLPLAPDPRSGFEMVLLRMLAFRP
ADSSGAAPRSPLKDLGISKATADSSQNPVAGAAVAAPVTIPAVSVPVISTVPAAAVAPAA
APAPPAPAPAPAPAPAPVVEAAPVVAPAQPEPIAAPAVMAEVAPQPAPQTEPEAPAKPVE
EAVDLPWDEPAAPVAVDAPTPPTPPTPPTPPTPPTPPVAAVEAPAAPLADAEDDDRDEEP
PPAEDYYEVDMDSFSYLDGEAAAPAQAEPEPEPAALPATGLAAEWLDLFPRLGMAGLTAS
IGANCTLVSVQDDVWHLHLDPGQSALYNATQQRRMNDALNQYHGRTLRLEVTIQKPEQET
PAQAAARRRAERQRAAEASIVADPYVQQMQQKFGAVIRAGSIEPLEAKA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcccgtaaatggcgtccgcgttcgttccgcgaaatggtcggc
cagacccacgtcctcaaggccctgatcaacgcgctggacaaccagcgcctgcaccacgcc
tacctgttcaccgggacccgcggcgtgggcaagaccaccatcgcacggatcctcgccaag
tgcctgaactgcgagaccggcatcagctccaccccctgcggccagtgttcggtgtgccgg
gagatcgacgagggccgcttcgtcgacctcatcgaagtggatgccgccagccgcaccaag
gtcgaggacacccgcgaactgctggacaacgtgcagtacgcaccgacccgcggtcgctac
aaggtctacctgatcgacgaagtgcacatgctctccacgcactcgttcaacgcgctgctc
aagacccttgaggagccgccgccgcacgtgaagttcctgctggcgaccaccgacccgcag
aagctgccggtgaccatcctctcgcgctgcctgcagttcagcctgaagaacatgccgccg
gagcgcgtggtcgagcacctgacccacgtgctcggcgccgagaacgtgcctttcgaggaa
gacgccctgtggctgctcggccgcgctgccgatggctccatgcgcgacgccatgagcctg
accgaccaggccatcgccttcggtgagggcaaggtgctggcggccgatgtgcgcgccatg
ctcggtaccctcgaccatggccaggtctacggcgtgctccacgcgctgctcgaaggcgat
gcccgtgcgctgctggatgccgtgcgccacctcgccgaacagggcccggactggactggc
gtgctcgccgagatcctcaacgtgctgcaccgcgtggccatcgcccaggtgctgccggac
gccgtcgacaacggccagggcgaccgcgacaaggtactggccctggcgcaggcgctgccc
ggcgaagacgtgcagttctactaccagatgggcctgatcggccgccgcgacctgcccctg
gcgccggacccgcgcagcggcttcgagatggtgctgctgcgcatgctggcgttccgccct
gcagacagcagcggagcggcgccgagatcgccgctaaaggacctggggatcagcaaggcc
acggctgattcctcccaaaacccagtggccggcgccgccgttgcggcgccggtaaccatt
cccgcggtcagcgtgccggtgatctccaccgtgccagccgccgcggttgcgcctgcagcg
gcgcccgcgcctccggctccggctccggctccggctccggctccggctccggtcgtggag
gccgcgcccgttgtggctccggcccaacccgagcccattgccgcgcccgcagtcatggcc
gaggttgccccgcagccggcgccgcagactgagcctgaggcgccagccaagcccgtcgag
gaagccgtcgacctgccgtgggacgagcctgccgcgccggtcgctgtcgatgctccgact
ccgccgactccgccgactccgccgactccgccgactccgccgactccgcccgtggccgcc
gtcgaggcgcctgccgcgcccttggccgatgccgaggacgacgaccgcgacgaagagccg
ccgccggccgaggactactatgaagtcgacatggactcgttcagctacctggatggcgaa
gccgcagcgccggcccaggccgagcccgagccggaaccggccgcgctgccggctaccggc
ctcgctgccgagtggctcgacctgttcccgcgcctgggcatggccggcctgaccgccagc
atcggcgccaattgcaccctggtgtcggtgcaggacgacgtctggcacctgcacctggac
ccggggcagagcgcgctgtacaacgccacccagcagcgccgtatgaacgacgcgctgaac
cagtaccacggccgcacgttgcgcctggaagtgactatccagaagcccgagcaggaaacc
cccgcccaggctgccgcccgtcgccgcgccgaacgccagcgcgcggccgaggcgtcgatc
gtcgccgacccctacgtgcagcagatgcagcagaaattcggtgcggtgatccgcgccggt
tccatcgaacccctggaggcgaaggcctga
DBGET
integrated database retrieval system
