Pseudomonas knackmussii: PKB_3504
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Entry
PKB_3504 CDS
T03081
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00470
D-Amino acid metabolism
pkc00550
Peptidoglycan biosynthesis
pkc01100
Metabolic pathways
pkc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PKB_3504 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PKB_3504 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PKB_3504 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkc01011
]
PKB_3504 (ddlA)
Enzymes [BR:
pkc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PKB_3504 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pkc01011
]
Precursor biosynthesis
Amino acid ligase
PKB_3504 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
ATPgrasp_ST
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CDF84847
UniProt:
A0A024HJZ3
LinkDB
All DBs
Position
complement(3685389..3686483)
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AA seq
364 aa
AA seq
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MAKLRVGVIFGGRSAEHEVSLQSAKNIVDALDRSRFEPVLIGIDKEGRWHLNDASDYLLN
QENPALIALNRSNRELAVVPGKAEHQLVETGSRQLLDHVDVIFSIVHGTLGEDGCLQGLL
RMADLPFVGSDVLGSAICMDKDVSKRLLRDAGIAITPFITLTRRTAARTPFAEAQRQLGL
PLFVKPANLGSSVGVSKVEDEAAYDAAVKLALAYDDKVLVEAAVKGREIECAVLGNDEPV
ASGCGEIVVSSGFYSYDSKYIDENAARVVVPADISAEASERIRRLAVEAFQVLECSGLAR
VDVFLTEDGEVLINELNSLPGFTRISMYPKLWQAAGMSYSELVSRLIDLAIERHTARRAL
QTNR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttgcgtgtcggggtgattttcggtgggcgttccgcggagcacgaggtgtcg
ctgcaatcggcgaagaacatcgtcgatgcgctggatcgctcgcgcttcgagccggtcctt
atcggcatcgacaaggagggccgctggcacctgaacgacgcctccgactacctgctcaac
caggagaacccggcgctgatcgcgctcaaccgttccaaccgcgagctggccgtggtgccc
ggcaaggctgagcaccagctcgttgaaaccggcagccgccagctgctcgaccacgtcgat
gtgatcttctccatcgtccacggcaccctcggcgaggacggctgcctgcaaggcctgctg
cgcatggccgacctgcctttcgttggctccgatgtgctgggctcggcgatctgcatggac
aaggatgtcagcaagcgcctgctgcgcgacgccggcatcgcgatcacccccttcatcacc
ctgacccgccgcactgccgcccgcacgcctttcgccgaggcacaacgccagctcggcctg
ccgctgttcgtcaaaccggccaacctgggttcctcggtgggtgtcagcaaggtcgaggac
gaggccgcctacgacgctgccgtgaagctggccctggcctacgacgacaaggtgctggtg
gaggcggcggtgaagggccgtgagatcgagtgcgcggtgctcggcaacgacgagccggtc
gccagcggttgcggcgagatcgtggtgagcagcggcttctactcctacgacagcaagtac
atcgacgaaaacgccgcgcgcgtggtggtcccggcggacatcagcgccgaggccagcgag
cgcatccgccggctcgcggtggaggccttccaggtgctggagtgctcggggctggcgcgg
gtcgacgtgttccttaccgaggatggcgaggtgctgatcaacgaactcaactcgctgccg
ggtttcacccgcatcagcatgtatcccaagctctggcaggccgccggcatgagctacagc
gaactggtcagccgcctcatcgacctggccatcgaacgccacaccgcgcgccgcgcgctg
caaaccaaccgctga
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