Pseudomonas kribbensis: DLD99_26610
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Entry
DLD99_26610 CDS
T06348
Name
(GenBank) choline dehydrogenase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
pke
Pseudomonas kribbensis
Pathway
pke00984
Steroid degradation
pke01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
DLD99_26610
Enzymes [BR:
pke01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
DLD99_26610
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
Abhydrolase_1
Pyr_redox_2
Abhydrolase_6
FAD_binding_2
FAD_oxidored
FAD_binding_3
NAD_binding_8
Pyr_redox
HI0933_like
Thi4
GIDA
Fer4_9
DUF4917
Lycopene_cycl
GDI
Fer4_6
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
AXI63893
UniProt:
A0A345RX77
LinkDB
All DBs
Position
complement(5804689..5808141)
Genome browser
AA seq
1150 aa
AA seq
DB search
MTRIATPISDIKEHYDVIVIGSGYGGGIAASRLSRAGKKVCLLERGREIQPGEYPNTMIA
ATEELQVHDPDGHIGSRTGLFDLHVNAQQNVVVGCGLGGTSLINANVSLEPTADVFKDPR
WPLAVREDQDGLLKAGYEKAREMLKPNPYPDSAPNLPKLDANKQSADFLKQGANFYKPPI
NVTFDKLPNNLNHVGVEQLPCNHCGDCVSGCNNKAKNTTLMNYLPDATNHGAEIFCQAQV
RHLERDSDGWIVHFQYLDSGREKFDAPTLFVKADIVVVSAGTLGSTEILLRSRDKGLAMS
GQLGENMSGNGDILGFGHNCEQTINGIGFGTHSAKEMKPVGPCITSIIDMRNEGDRSSRM
VIEEGSIPGALGRPMVPAMAGFAEMIGVPTDDSFSGKVKYKEREAESFLRGPYYGALHNM
QTYLIMSHDSGQGRMVLDSKDQLRIDWPGVGEQENFKIGNERLHQSTKALGGIWVENPIW
TKLLKHSIVSVHPLGGCVMGEDAAQGVVNHKGQVFSGASGTDVYANLYVTDGAVIPTSLA
VNPLLTISAVSERNMGLLAADRGWKIDYTLPSAPRKQPVPPTLGVQFTETMKGYFSRAFT
AAQSTDLKVYEAAAKRGEADNSPIDFTLTITANDLNRMIKEPEHAATIVGTVIAPALSPQ
PLTASNGVFNLFEQFEQQVDTRHMKYDMKLTAEDGNDYFFSAFKTVPEDNGVLNIWHDTS
TLYVTLYRGPDKSGEVIGSGVMHIKPADFAKQMTTMKVLNARNERERIEGLARFGKFFAG
ILWESYGGVFAGDKYFNPDAPPRLKRPLDAPTPDVHFFPTEDGVELRLSRYQAGSKGPVM
LVHGLGVGSNIFSTDTIQTNLLEFLCKHDYDVWLLDFRVSILLPASKKEWNGDQIAQYDF
KAAIGQIQQQTGAKDVQCVVHCYGATTFFMSLLAGLQGVRSVVCSQIAADTVVATATGLK
AGLHLPGMLDAIGIKSMTAYADSKENWFNRLYDKALNGYARIEAQGYCTNPVCHRITFMY
ASLYRHDTLNETLHDNLHELFGESNIETFEHLALIVRKGHLVDFKGNDVYMPHFDRLTMP
ICFISGAENQCYLPESTLKTYQRVCEKHGPERYSRHVVPGYGHIDCMFGKNAVVDVYPII
LEHLEKTALG
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgacacggatcgcaacgcccatcagcgacatcaaggaacactacgacgtgatcgtcatc
ggctccgggtacggcggcggcattgccgcttcgcgcctgtctcgggccggcaagaaggtg
tgcctgctggagcgcggtcgggaaatccagcccggcgaataccccaacaccatgatcgct
gcgaccgaagagctgcaggtgcacgatccggacggccacatcggctcgcgcaccgggttg
ttcgatctgcacgtcaacgcgcagcagaacgtagtggtcggctgtggcctcggtggcacg
tcgttgatcaatgccaacgtttcgctggagccgacagccgatgtgttcaaggatccacgc
tggccgttggcggtgcgcgaggaccaggatggtttgctcaaggccggttacgaaaaagcc
cgggagatgctcaaacccaacccttatccggacagcgcaccgaacctgcccaagctcgat
gccaacaaacagtccgcggacttcctcaagcaaggcgcgaacttctacaagccgccgatc
aacgtgaccttcgacaaactgccgaacaacctcaaccacgtcggcgtcgagcaactgccg
tgcaaccactgcggtgactgcgtttcaggctgtaacaacaaggccaaaaacaccacgctg
atgaactatctgccggacgccaccaatcacggcgcggagattttctgccaggcccaggtg
cggcatctggaacgcgacagtgatggctggatcgtgcacttccagtacctcgacagtggt
cgcgagaagttcgacgcgccaacgctgttcgtgaaggccgacattgtcgtggtatccgcc
ggcactcttggttccaccgagattctgctgcgctcgcgggacaagggcctggcgatgtcc
ggccagctcggcgagaacatgagcggcaacggtgacatcctcggcttcggccacaactgc
gagcagaccatcaacggcatcggtttcggtacgcactcggccaaggagatgaaaccggtc
ggcccgtgcatcacctcgatcatcgacatgcgcaacgagggtgatcgcagcagccgtatg
gtcatcgaggaaggctcgatccccggcgccctcgggcggccgatggtgccggcgatggcc
gggttcgccgagatgatcggggtgcccaccgacgacagtttcagcggcaaggtgaagtac
aaggagcgcgaagccgaaagcttcctgcgcggcccttactacggcgcgctgcacaacatg
cagacttacctgatcatgagccacgacagcggccaggggcggatggtcctcgacagcaag
gatcaactgcgcatcgactggccgggcgtcggcgagcaggaaaacttcaagatcggcaac
gaacgcctgcaccagagcaccaaggcactgggcgggatctgggtcgagaatccgatctgg
accaaattgcttaagcacagcatcgtctcggtgcatccgctgggcggttgcgtgatgggc
gaagacgccgcgcaaggcgtggtcaaccacaagggccaggtgtttagcggcgccagtggc
accgatgtctacgccaacctgtacgtgaccgacggcgcggtgattccgacctcactggcg
gtcaacccgctgctgaccatctccgccgtcagcgagcgcaacatgggcctgctggccgcc
gaccgtggctggaaaatcgattacacattgccctcggcaccgcgcaaacaaccggtgcca
ccgaccctcggtgtacagttcaccgagaccatgaaaggctacttctcccgggccttcacc
gctgcgcagagcaccgatctcaaggtctacgaagcggcggccaaacgtggcgaggcagac
aactcgccgatcgatttcaccctgaccatcaccgccaacgacctcaaccggatgatcaag
gagccggagcacgccgcaaccatcgtcggcacggtgatcgccccggccctgtcgccgcag
ccgctgaccgccagcaacggcgtgttcaacctgttcgagcaattcgagcagcaggtcgac
acacgccacatgaaatacgacatgaaactgaccgccgaggacggcaacgactatttcttc
agcgccttcaaaaccgtgccggaagacaacggcgtgctgaacatctggcatgacaccagc
accctctacgtcacgctgtatcgcgggccggacaagtccggcgaagtcatcggctcgggt
gtgatgcacatcaaaccggcggatttcgccaagcagatgaccaccatgaaggtcctcaac
gcgcgcaacgagcgtgagcgcattgaagggctggcgcggttcggcaagttcttcgccggg
atcctctgggagagttacggcggggtgtttgccggcgacaaatacttcaaccccgacgcg
ccgccacgcttgaaacggccgctggatgcgccgacgccggatgtgcatttcttccccacc
gaggacggcgtggaactgcgcctgagccgctatcaggccggcagcaaaggcccggtgatg
ctggtgcacgggttgggtgtgggctcgaacatcttttccaccgacaccatccagaccaac
ctgctggagtttctctgcaagcatgattacgacgtgtggctgctggatttccgggtgagc
atcctgctgccggcgagcaagaaggaatggaacggcgaccagatcgcccagtacgacttc
aaggctgccatcgggcagatccagcagcagaccggcgcgaaggacgtgcagtgtgtggtg
cattgctacggcgcgacgacgttcttcatgtcgttgctcgccggtttgcagggcgtgcgc
tcggtagtctgctcgcaaattgccgctgatacggtggtcgcgacggcgacggggctgaag
gccggtctgcacctgccggggatgctcgacgccattggcatcaaatccatgaccgcctac
gccgacagcaaggaaaactggttcaaccgcctctacgacaaggccctcaacggctacgcg
cggatcgaagcccagggttattgcaccaacccggtgtgccaccgcatcaccttcatgtac
gcctcgctgtaccgccacgacaccctcaacgagacgctgcacgacaacctgcacgaactg
ttcggcgagtcgaacatcgagacgttcgagcatctggcgctgatcgtgcgcaaagggcat
ctggtggacttcaagggcaacgatgtgtacatgccgcacttcgaccggctgaccatgccg
atctgcttcatcagcggcgcggagaaccagtgctatttgccggagagcacgctcaagacc
tatcagcgggtttgcgagaagcatgggccggagcgctatagccggcatgtggtgccgggc
tatggccacatcgattgcatgttcggcaagaacgcagtggtcgatgtgtatccgatcatc
cttgaacacctggagaaaacggccctcggttga
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