Paraburkholderia kirstenboschensis: RW095_32000
Help
Entry
RW095_32000 CDS
T09457
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00550
Peptidoglycan biosynthesis
pkf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RW095_32000 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pkf01002
]
RW095_32000 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkf01011
]
RW095_32000 (dacB)
Enzymes [BR:
pkf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RW095_32000 (dacB)
Peptidases and inhibitors [BR:
pkf01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
RW095_32000 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pkf01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RW095_32000 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
WOD17431
LinkDB
All DBs
Position
1:2095306..2096988
Genome browser
AA seq
560 aa
AA seq
DB search
MTHAFLSFAARHLHHAALRSRLTSPFIPSLSACSVAVAPRASAWLLVCAALAGGASLPLA
AQARVKTTHPSINVSTVLPQSVMIGLQRAHVPLSSISVVIEKVGDRTPIVALNAGKPMMP
ASTMKLVTTYSGLSILGPDYRWRTNAYVDGTVDANGVLHGNLYIQGTGDPKLVPEELIDL
VQKIHKAGIRGIDGALVLDKRYFDPSTRDLPPFDDDASAPYNVGPDPLLYAFKSLSFTLT
PSSDGTVTIDVLPALAQLQIDNQMRAVNGPCRGEAASVSPTVTPTPNGTLVASFAGDYSV
RCGPRTVNVAVLDHSAFFAGGFLALWQQTGGTFSGATREGAVPVGAKLVATHQGPVLSDI
VRDINKFSNNTMARNLFLSIGAAEEKGPATPAKSARAIEAFLRRDSIDMEYLTLDNGSGL
SRDEHITALSLADLLQRANASPVAQVFVQSLPIAGVDGTMRNRLTNQGAGGNAQIKTGTL
RDVRAIAGYVASADGNSYVVVSFINDPHSEAARAAHDALLEWVYQGPNSGFSRISAPAAE
SASAAPHGKPRKNPRKRDAH
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgctttcctgtcttttgccgcacgccatcttcatcatgcggcgctgcgctcg
cgcttaacgtcccctttcatcccatccttgtccgcctgctctgttgccgtcgcgccgcgc
gcgagcgcgtggctgctcgtctgtgccgcgttagccggcggcgcgtcgctgccgcttgcc
gcgcaggcgcgcgtcaagacgacacatccgagcatcaacgtcagcaccgtgttgccgcaa
tcggtcatgatcggcttgcagcgcgcgcacgtgccgttgtcgtcgatcagcgtggtcatc
gaaaaagtcggcgatcgcacgccgatcgtcgcgctgaatgcgggcaagccgatgatgccc
gcctcgacgatgaagctcgtcaccacctactccggtctgtcgattctcggccccgactac
cgctggcgcaccaacgcgtacgtcgacggcacagtcgacgccaacggcgtgctgcacggc
aatctgtacattcaaggtacgggcgacccgaagctggtgcccgaagaactcatcgacctc
gtgcagaagatacacaaggcggggattcgcggcatagacggcgcgctggtgctcgacaag
cgctacttcgatccgtcgacgcgcgatctgccgccgttcgacgacgacgcgagcgcaccg
tataacgtcgggcccgatccgctgctgtacgcattcaaatcgctatccttcacgctgacg
ccttcatcggacggcacggtcacgatcgacgtactgcccgcgctcgcacagttgcagatc
gacaatcagatgcgcgcggtcaacggcccatgccgcggcgaagcggcatccgtatcgccc
accgtcacgccgacgcctaacggcacgctcgtcgcatcgttcgccggcgactattcggtg
cgctgcggcccgcgcaccgtcaacgtcgcggtgctcgatcactcggccttcttcgcgggc
ggcttccttgctttgtggcagcagacgggcggcaccttcagcggcgcgacgcgtgaaggc
gctgtgcccgtcggcgcaaaactggtggccacgcatcaggggccggtgctgtcggacatc
gttcgcgacatcaataagttcagcaacaacacgatggcgcgcaacctgttcctgtcgatc
ggagcagccgaagaaaaagggcctgcgacgcccgccaagtcggcccgcgcgatcgaggcg
ttcctgcggcgtgacagcatcgacatggaatatctgacgctcgacaatggctcgggcctc
tcgcgcgacgagcacatcaccgcactctcgctcgccgacctgctgcaacgcgccaacgcg
agccctgtcgcccaggtgttcgtgcagtctctgccgatcgccggtgtcgacggcaccatg
cgcaaccgcctgaccaaccagggcgcaggcggcaacgcacagatcaagaccggcaccttg
cgcgacgtgcgggcaatcgcgggctacgtggcatcggcggacggcaacagctacgtggtg
gtgagcttcatcaacgatccgcactccgaagccgcgcgcgccgcgcacgacgcgctcctc
gaatgggtgtatcaaggaccgaactcgggcttcagcagaatctcggcgcctgccgccgaa
tcggcaagcgcggcaccgcacggcaagcctaggaaaaacccgcgcaagcgcgacgcgcat
tga
DBGET
integrated database retrieval system
