Paraburkholderia kirstenboschensis: RW095_32960
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Entry
RW095_32960 CDS
T09457
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00470
D-Amino acid metabolism
pkf00550
Peptidoglycan biosynthesis
pkf01100
Metabolic pathways
pkf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RW095_32960
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RW095_32960
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RW095_32960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkf01011
]
RW095_32960
Enzymes [BR:
pkf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RW095_32960
Peptidoglycan biosynthesis and degradation proteins [BR:
pkf01011
]
Precursor biosynthesis
Amino acid ligase
RW095_32960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATPgrasp_ST
TTL
ATP-grasp
ATPgrasp_YheCD
PPR
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
WOD17609
LinkDB
All DBs
Position
1:complement(2307035..2307988)
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AA seq
317 aa
AA seq
DB search
MSSIQSDQLAKRFGKVAVLLGGNSAEREVSLNSGRLVLQGLRDAGVDAHAFDPAERPLAA
LKEEGFVRAFNALHGGYGENGQIQGALDFYGIKYTGSGVLGSALGLDKFRTKLVWQQLGI
PTPPFEAVLRGDDYEARAKDIVAKLGLPLFVKPASEGSSVAVIKVKSADALPAALVEAVK
YDRIVVVEKSIEGGGEYTACIAGDLDLPVIRIVPAGEFYDYHAKYIANDTQYLIPCGLTP
DEEARLKVLARRAFDVLGCTDWGRADFMLDADGNPYFLEVNTAPGMTDHSLPPKAARAVG
ISYQELVVGVLALTLKD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtatccagtcagatcaactcgctaaacgattcggcaaagtggccgtgctgctc
ggtggaaattccgctgagcgcgaggtgtcgctcaattccgggcgcctcgtgctgcaaggt
ctgcgcgacgccggcgtcgacgcccatgcgttcgatccggccgagcgtccgcttgccgcg
ttgaaggaagaaggtttcgtgcgcgcgttcaatgcgctgcacggcggttatggcgaaaac
ggccagattcagggcgcgctcgatttttacggcatcaagtacacgggcagcggcgtgctg
ggttcggcgctcgggctcgataaattccgcaccaagctcgtgtggcagcaactcggtatt
ccgacgccgccgttcgaagccgtgctgcgcggcgacgactacgaagcgcgcgcaaaagat
atcgtcgcgaagctcggtttgccgcttttcgtgaagccggcaagcgaagggtcgagcgtc
gcggtcatcaaggtgaagagcgccgacgcactgccggcggcgctcgtcgaagcggtgaag
tacgacaggattgtggtggtcgagaagagcatcgaaggcggcggcgaatacaccgcgtgc
atcgcgggcgacctggatttgccggtgatccgcatcgtgccggccggtgagttctacgac
tatcacgcgaagtacatcgcgaacgacacgcagtatctgattccgtgcggtctgacgccc
gacgaagaagcgcgtttgaaagtgctggcgcgccgtgcgttcgacgttctcggctgcacc
gattggggccgcgccgacttcatgctggacgccgacggcaatccgtatttcctggaagtg
aacacggcgccgggcatgaccgaccactcgctgccgccgaaagcggcgcgcgcggtgggc
atcagctatcaggaactggttgtcggcgtattggcgctgacgctcaaggattaa
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