Pseudomonas khazarica: JLK41_04840
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Entry
JLK41_04840 CDS
T07269
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pkh
Pseudomonas khazarica
Pathway
pkh00470
D-Amino acid metabolism
pkh00550
Peptidoglycan biosynthesis
pkh01100
Metabolic pathways
pkh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JLK41_04840
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JLK41_04840
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JLK41_04840
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkh01011
]
JLK41_04840
Enzymes [BR:
pkh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
JLK41_04840
Peptidoglycan biosynthesis and degradation proteins [BR:
pkh01011
]
Precursor biosynthesis
Amino acid ligase
JLK41_04840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATP-grasp_5
RimK
GARS_A
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
QTS87504
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All DBs
Position
1060332..1061273
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AA seq
313 aa
AA seq
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MSLHSTLDPKAFGRVAVLFGGKSAEREVSLKSGNAVLGALQAAGVDAFGIDVGDDFLQRL
GREKIDRAFIVLHGRGGEDGSMQGLLECAGIPYTGSGILASALAMDKLRTKQVWHSLGLP
TPRHAVLTSPADCEAAAAELGFPLIVKPAHEGSSIGMAKVDSAQALLAAWQDAARYDSQV
LVEQWIAGPEYTIAVLRGEVLPPIGLGTPHSFYDYDAKYLADDTQYRIPCGLSAEKEAEL
KDLTARACDAVGTQGWARADVMQDASGQFWLLEVNTVPGMTDHSLVPMAARAAGLDFQQL
VLAILADSVEARG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcacagtaccctcgaccccaaggccttcggccgcgtcgccgtactgttcggc
ggcaagagcgccgagcgcgaggtctcgctcaagtccggcaacgccgtgctcggtgccctg
caggccgccggtgtggacgccttcggcatcgatgtgggggatgacttcctgcagcgtctg
ggccgcgagaagatcgaccgcgccttcatcgtgctgcacggtcgcggcggtgaggatggc
tccatgcagggcctgctcgagtgtgccggcattccctataccggcagcggcatcctcgcc
tctgccctggccatggacaagctgcgcaccaagcaggtctggcacagcctcggcctgccg
acgccgcgccacgccgtgctgacttcgccggccgactgcgaggccgctgcggccgagctg
ggcttcccgctgatcgtcaaaccggcccacgaagggtcgagcatcggcatggccaaggtg
gacagtgcccaggcgctgctcgcggcctggcaggatgccgcccgctacgacagccaggtg
ctggtcgagcagtggatcgccggtccggaatacaccatcgccgtgctgcgtggcgaagtg
ctgccgccgattggcctgggcaccccgcacagcttctacgactacgacgccaagtacctg
gccgatgacacccagtaccgcattccctgcggcttgtccgccgagaaggaagccgagctg
aaggacctgaccgcgcgcgcctgtgacgccgtgggtacccagggctgggcgcgcgccgat
gtgatgcaggatgccagcggccagttctggctgctggaagtgaacaccgtaccgggcatg
accgatcacagcctggtgccgatggccgcgcgcgcagccggcctggatttccagcagctg
gtgctggcgatcctggctgacagcgtcgaggcgaggggttaa
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