Pseudomonas khazarica: JLK41_21905
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Entry
JLK41_21905 CDS
T07269
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
pkh
Pseudomonas khazarica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_50
PAS_9
PAS_4
HTH_8
AAA_5
Mg_chelatase
PAS_8
AAA
AAA_2
AAA_16
HTH_1
AAA_7
MCM
HTH_28
PAS_7
nSTAND3
TsaE
AAA_22
KORA
DEAD
AAA_14
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
QTS85936
LinkDB
All DBs
Position
complement(4631424..4632794)
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AA seq
456 aa
AA seq
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MDFDAPGFRELLDALHDGVYITDADGITLKVNSAYERLTGLRSEDVVGQHMQALVEQGVI
SQSVSLRVLKEGKALSLMQSVSQGKRLLVSGTPIFAEDGRVRYVVSTVRDMTELLRMKHE
RDELQQLRKLRSSTARLHAGQRDDLLDTSPVANLPASGRVFALARQVAASDVKVLLQGET
GVGKTLIAQYIHKSSPRAAQPFLALNCGALPENLIEAELFGYVAGAFTGAGSKGKRGLLE
LAHQGTVFLDEIGDLPLALQVKLLKVIEESRFIPVGGLELKEVDVRIVTATHHDLRAMVS
EGRFRADLYYRLNVVPIHVPALRERREEIQPLLDFYLAEFNQRYGRELSWGLEALDALTD
YDWPGNIRELINLVERLVVTCSAGSVELFDLPEEMRAARGARDDEHLLPLRKQVEQLERR
LIRQALVQHKTTREAARVLGLSQATLVQKMKRWEQG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgatgccccggggtttcgcgaactgctcgatgccctgcatgacggtgtctac
atcaccgatgccgacggcattaccctcaaggtcaacagcgcctacgaacgcctgaccgga
ctgcgcagcgaggacgtggtcggccagcacatgcaggcgctggtggagcagggggtgatc
tcgcaatcggtttccctgcgcgtgctcaaggagggcaaggcgctgtcgctgatgcagagc
gtcagccagggcaagcgcctgctggtcagcggtacgccgatcttcgccgaggacgggcgc
gtgcgttatgtggtcagcaccgtgcgtgacatgaccgaactgctgcgcatgaagcacgag
cgcgacgagctgcagcaactgcgcaagctgcgcagcagcaccgccaggctgcatgccggc
cagcgcgatgacctgctcgacacctcgcccgtggccaacctgccggcctcgggcagggtc
ttcgccctggcccgtcaggtcgccgccagcgacgtgaaggtgctgctgcagggagaaacc
ggtgtgggcaagacgctcatcgcgcagtacatccacaagagcagcccgcgggcggcacag
ccgtttctggcgctcaactgtggcgcgctccccgagaacctgatcgaggccgaactgttc
ggctatgtcgccggggccttcaccggcgccggcagcaagggcaagcgcggcctgctggag
ctggcgcaccagggcacggtgttcctcgacgaaatcggcgacctgccgctggcgctgcag
gtgaagctgctcaaggtgatcgaggagagccgcttcattccggtcggcgggctggaactc
aaggaggtggacgtgcgcatcgtcaccgccacgcaccacgacctgcgcgcgatggtcagc
gaagggcgttttcgcgccgacctctattaccgcctcaacgtggtgccgattcacgtgccg
gcgctgcgtgagcggcgcgaggagatccagccgctgctggatttctacctggccgagttc
aaccagcgctacggccgcgagctgagctgggggctggaggccctcgatgcgctcaccgac
tacgactggcccggcaacattcgcgagctgatcaacctggtcgaacgcctggtggtcacc
tgcagcgccgggagcgtggagctgttcgacctgcccgaggagatgcgtgccgcccgtggc
gcgcgtgacgatgagcacctgctgccgctgcgcaagcaggtcgagcagctggagcgccgc
ctgatccgccaggcgctggtgcagcacaagaccacgcgagaggctgccagggtgctgggc
ctgagccaggcgaccctggtgcagaagatgaagcgctgggaacagggttga
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