Paramormyrops kingsleyae: 111844062
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Entry
111844062 CDS
T05788
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111844062 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pki03021
]
111844062 (supt5h)
03019 Messenger RNA biogenesis [BR:
pki03019
]
111844062 (supt5h)
Transcription machinery [BR:
pki03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111844062 (supt5h)
RNA polymerase I system
111844062 (supt5h)
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
111844062 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
DUF150_C
Ribonuc_P_40
Arabino_trans_N
Motif
Other DBs
NCBI-GeneID:
111844062
NCBI-ProteinID:
XP_023667936
Ensembl:
ENSPKIG00000006261
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MSDSEDSDFSDNQSERSSEAEEVDENEEEEGQGSIAGSDKGEEDAEDIEEDEDEYDEEEE
EEEDDDRPRKKPKYGGFILDEADVDDEYEDEDPWEDGAEDILEKEEVEVSNLEHTVLDED
HSGSRRLQNLWRDSREEALGEYYMRKYAKSSGGEHFSGGSEELSDDITQQQLLPGVKDPN
LWTVKCKIGEERATAIALMRKFIAYQCTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKAA
IEGVGNLRMGFWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEP
SQNTISLKLIPRIDLDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGEVSHDGDF
MIFEGNRYSRKGFLFKSFAMSAVIIEGVKPTLSELEKFEDQPEGIDLEVVTETTGKEREH
NLQAGDNVEVCEGELINLQGKILSVDGNKITLLPKHEDLKDPLEFPAHELRKYFKMGDHV
KVIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGE
LVQLDPQTVGVIVRLERETFQVLNMHGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHVKD
IVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFT
VGGFAPMSPRISSPMHPGGGGQPQRGGGGGMGRGRGRRDNDLIGQTVRISQGPYKGYIGV
VKDATESTARVELHSTCQTISVDRQRLTTVGAKRHGGMTSTHGRTPMYGSQTPMYGTGSR
TPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRPDDDFEFGYDDE
PSTSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTDQYSPYAAPSPQGSYQ
PSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGY
NPHTPGSNIDQTSCDWVTTDIVVRVKDTFLDGQVINQTGVIRSVTGGMCSVFLQDTEKVV
SISSEHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMELDEQLKILNLRFLGK
MEV
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagcgaggacagtgatttctctgacaatcagagcgaacgcagcagcgaagcc
gaagaggtcgatgaaaatgaggaggaagaggggcaaggcagcattgcaggcagcgacaaa
ggggaggaagatgcagaagacatagaggaagatgaggatgagtatgatgaagaggaggag
gaggaggaggatgatgatcggcccaggaagaaaccaaaatatggaggctttatcttagat
gaagctgatgtggatgatgaatacgaagatgaagatccttgggaggatggtgctgaagat
atattggagaaagaggaagttgaagtgtcaaaccttgagcacacggttctggatgaggac
cactctggatcgcgccggctccaaaatctgtggagggactctcgagaggaggctctggga
gagtactacatgagaaagtatgcaaagtcctctggaggagaacatttctctggggggtct
gaggagctttctgatgacatcacccagcagcagctactccctggagtcaaagatcctaat
ctatggactgtcaagtgtaagatcggggaagagagggcaactgccattgctctaatgagg
aagttcattgcctaccagtgtacagacacgccactgcagataaaatctgtggtagcccct
gagcatgtaaagggctacatctacgtcgaggcctataagcagactcatgtaaaggctgca
atcgagggcgtgggaaacctgcgcatgggcttctggaaccagcagatggtgcccatcaag
gaaatgaccgacgtcctcaaggtggtcaaagaggtcactaaccttaagcctaaatcctgg
gtgaggctgaaacgaggactctacaaggatgacattgctcaggtggattatgttgaacca
agtcaaaatacgatatcattaaaactgattccacgcatagatctggaccgaatcaaggcc
cgaatgagcctgaaagactggtttgccaaaaggaagaagttcaagagacctccacagaga
ctctttgatgctgagaagatcaggtcacttggaggtgaagtcagtcatgacggagatttc
atgatatttgaaggcaacagatacagccgaaaaggatttctttttaaaagctttgccatg
tccgctgtaatcatagagggtgtgaagcctacattgtccgagctggaaaagtttgaagac
caaccagaagggattgaccttgaggttgtcacagaaaccacaggcaaggaacgggaacac
aatctgcaggctggagacaatgttgaggtgtgcgaaggggagctgattaatttacaaggc
aagatcctcagcgtagatggaaacaagatcaccctcttgcccaagcatgaggacctcaag
gaccccttggagttcccagcccatgagctaaggaagtatttcaagatgggtgaccacgtg
aaggtgatagctggacgttatgaaggtgacacagggctcatcgtacgtgtggaggagaac
tttgtcatacttttttcagatctgaccatgcatgagttgaaggttcttccacgtgacctt
cagctctgctcagaaacagcttctggggtggatgctggtggccagcatgagtggggagag
ctggtacaacttgacccccaaactgtgggagtcattgtacgactggaaagggagacattt
caggtccttaacatgcatgggaaggtgctcacggttcggcatcaggctgtaaaccggcga
aaagacaaccgctttgctgtggctcttgactcggaacagaacaacatccatgtgaaggac
attgttaaggtcattgatgggccccactcggggcgggaaggagaaatccgtcatttgttc
agagggtttgctttcctgcactgtaagaagctggtggaaaacggcggcatgtttgtctgc
aagactcgtcacttggtccttgctggtggttctaagcccagagatgttaccaatttcaca
gtgggcgggttcgcacccatgagcccgcgaatcagcagcccaatgcatccggggggtggc
ggccaaccgcaaagaggtggaggtggaggcatgggccgggggcggggaaggagggacaat
gacctgattggacagacggtccggatttcacagggaccatacaaaggttacattggagta
gtaaaggatgccactgaatccactgcccgtgtggagctgcattctacttgccagacaatc
tccgtggaccgccagcgccttacaacagtgggtgccaagcgtcacggaggaatgacctct
acacatggaagaacaccgatgtatggatctcaaacccccatgtatgggactggttcccgg
actccgatgtacgggtcacagacgcctcttcatgatggaagccgaacacctcactatggc
tctcagaccccattgcatgatgggagtcgtacaccgggacaaagtggagcctgggacccc
aacaacccaaataccccttcacgccccgatgatgattttgagttcggttatgatgatgag
ccttcaacatctccgcaaggctatggtggtacacctaacccccaaacccccgggtaccct
gaagtaccgtccccacaggtcaacccacagtacaaccctcaaacacctggcactccggcc
atgtacaataccgaccagtactctccatatgcagctccctcaccgcaaggttcctaccag
cccagccccagcccccagagttatcaccaggtggcccctagtcctgtgggctatcaaaac
acacattctcctgctagctaccaccctactccttcacctatggcctaccaggctagtcca
agccccagtccggtaggctacagccccatgactccaggtgccccttctcctggtggatat
aatccccacacaccaggatccaacattgaccagacctcatgtgactgggttactacggac
atcgtggttagggtcaaggatacgtttctcgacggacaggttatcaaccagacgggcgtg
atccgaagcgtcacgggagggatgtgctctgtcttcctccaagacacagagaaagtagtt
agcatatccagtgaacatctagagccagtaacgcccaccaagaacaacaaggtgaaggta
atactgggtgaggaccgagaggcaaccggcgtgcttctgagtattgatggggaggacggc
atcgtacgaatggaactggatgagcaactcaaaattttgaatcttcgtttcctggggaaa
atggaagtttaa
DBGET
integrated database retrieval system
