Paramormyrops kingsleyae: 111855986
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Entry
111855986 CDS
T05788
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06236
collagen type I alpha
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04510
Focal adhesion
pki04512
ECM-receptor interaction
pki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111855986
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111855986
09142 Cell motility
04820 Cytoskeleton in muscle cells
111855986
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pki00536
]
111855986
Glycosaminoglycan binding proteins [BR:
pki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111855986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
111855986
NCBI-ProteinID:
XP_023691321
Ensembl:
ENSPKIG00000017673
LinkDB
All DBs
Position
Unknown
AA seq
1447 aa
AA seq
DB search
MFSFVDIRLALLLASTALLARCQGEDDRPAGSCTLDGQLYNDKDVWKPEPCQICVCDSGT
IMCDDVICEDTSDCPNPEIPFGECCPICPDGPQGPQIEGPKGDRGAKGDRGLPGPPGNNG
IPGESGLPGPPGPPGPPGLGGNYSPQMSFGYDEKSGGVSLPGPMGPMGPRGPPGPPGASG
PQGFTGPPGESGEAGSPGPMGARGPAGPPGKNGDDGESGKPGRPGERGPSGPQGARGFPG
TPGLPGIKGHRGFSGLDGAKGETGPAGPKGEPGAAGENGTPGAMGPRGLPGERGRAGAPG
TAGARGNDGAAGAAGPPGPTGPAGSPGFPGGPGVKGELGPQGTRGADGPQGARGEPGNPG
PAGAAGPSGNPGADGASGAKGAPGPAGIAGAPGFPGPRGPSGPQGAAGAPGPKGNTGEAG
APGVKGEAGAKGEGGPPGVQGPPGPSGEEGKRGPRGEPGAIGARGATGERGAPGGRGFPG
ADGSAGPKGVPGERGPAGLVGPKGAAGEPGRNGEPGMPGSKGMTGSPGSPGPDGKSGAPG
PAGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGEPGKPGEKGVMGSIGATGAPGKDGDVG
APGAPGPVGPSGERGEQGPGGPPGFQGLPGPQGASGEPGKPGEQGVPGDAGAPGVAGSRG
DRGFPGERGAPGASGPLGARGSPGSPGNDGAKGESGAPGAPGAQGPPGLQGMPGERGAAG
LPGLKGDRGDHGAKGTDGAPGKDGIRGMTGPIGPPGPAGAPGDKGETGPSGPLGPSGARG
PPGERGETGAVGPAGFAGPPGADGALGAKGEPGDNGAKGDAGTPGPPGPTGAPGPQGAVG
STGPKGTRGAAGPPGATGFPGAAGRVGPPGPSGNAGPPGPSGPPGKEGQKGVRGETGPAG
RTGEVGAAGAPGTPGEKGAPGSDGPPGSSGIPGPMGIAGQRGIVGLPGQRGERGFPGLSG
PSGEPGKQGSNGPSGERGPPGPMGPPGQSGAPGEPGREGTPGTEGPAGRDGAAGAKGDRG
ETGASGPNGPPGPPGAPGPVGPAGKTGDRGETGPAGVSGALGPPGPRGPAGPAGARGDKG
ETGEAGERGMKGHRGFTGLQGPPGPSGPSGDQGPAGASGPAGTRGPAGSAGSPGKDGMNG
LPGPMGPPGPRGRTGEIGPAGPPGPPGPTGPPGAPGGGFDMGFISQPAQEKAPDPFRLYR
ADDANVMRDRDLEVDTTLKSLSQQIENIRSPDGTKKNPARTCRDLKMCHPDWKSGEYWID
PDQGCPQDAIKVYCNMETGETCVYPIEAEVPKKNWYTSKNAKEKKHVWFGEAMTDGFQFE
YGGQDSKVEDVNIQLTFLRLMSTEASQNITYHCKNSIAYMDQQAGNLKKALLLQGSNEIE
IRAEGNSRFTYSVAEDGCTSHTGTWGKTVIDYKTTKTSRLPVIDIAPMDVGAPNQEFGIE
IGPVCFL
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggatattcggctagctctcctgctggcttcaacggcgcttctggca
agatgtcaaggcgaggatgatcgcccagctggtagctgtacgttggacggccagttgtac
aacgacaaggacgtatggaaacctgagccctgccagatctgcgtgtgcgacagcggcacc
atcatgtgcgacgacgtgatctgtgaagatacatctgactgccccaatccagaaatcccc
ttcggggaatgctgcccaatctgccctgatggcccacagggacctcagattgagggaccc
aaaggtgaccgcggtgccaaaggcgacaggggtcttcctgggcctcctggtaataatggc
attcctggcgaatccggtcttcccggcccccccggcccccccggacctcctggccttggc
ggaaactattctcctcaaatgtcttttggatatgatgagaaatctggaggagtatctctc
ccaggcccaatgggtccaatgggtccccgcggtcctcctgggccccctggtgccagcgga
cctcaaggtttcaccggccctcccggtgagtccggtgaggctggctctcctggtcccatg
ggggcacgtggaccagctggtccaccaggaaagaacggagatgatggtgagtctggcaag
cctggccgtcctggagagcgaggtccatctggcccacagggtgctcgtggcttcccagga
accccaggtctccctggcatcaagggacacagaggtttcagcggtctagatggagctaag
ggagagactggccctgctggtcccaagggggagcctggtgcagctggtgagaacggaact
cctggcgcaatgggtcctcgtggtctccctggtgagagaggccgtgctggtgctcctgga
actgctggtgctcgtggtaatgatggcgcagctggtgccgctggtcctcctggaccaact
gggcctgctggttcccctggattccccggtggccctggagttaagggtgagttgggacct
caaggaacccgtggtgcggatggaccccaaggagctcgcggtgagcccggcaaccctggg
cccgctggagctgctgggccttcaggaaaccctggtgctgatggtgcctctggtgccaag
ggcgctcctggccctgctggtattgctggtgctcccggcttccctggacctcgtggtcct
tctggaccccagggtgctgcaggtgctcctggtccaaagggtaacactggtgaggctggt
gctcctggtgtcaagggagaagccggtgctaaaggagagggtggcccccctggagtccag
ggcccccctggcccttctggagaggagggaaagcgaggcccccgtggtgagcctggtgca
attggagctcgtggagccactggcgagcgtggtgctcccggtggtcgtggtttccctggc
gctgatggatctgctggacctaagggtgtccccggtgagcgaggacctgccggacttgtg
ggccccaagggtgccgcaggtgaaccgggccggaatggtgagcctggaatgccaggatcc
aagggtatgactggcagcccgggcagccctggtcctgatggcaagtctggtgctcctggt
cctgctggacaagatggtcgccctggtcctcctggctctgttggagctagaggccagcct
ggagtcatgggattccctggaccaaagggtgctgctggtgaacctggcaaacctggagag
aaaggtgtgatgggatccattggcgctaccggtgcgcctggcaaagacggtgatgtcggc
gcccctggagctcctggtcctgttggaccttctggtgagcgaggtgagcagggcccaggc
ggcccccccggattccagggtcttcctggacctcaaggtgccagtggtgagcccggcaag
cctggtgaacagggtgttcctggtgatgctggtgccccaggagttgctggatctaggggt
gacagaggtttccctggtgagcgtggtgcccctggcgcttccggtcctttaggtgcccgt
ggatctcccggctcccctggtaacgacggtgccaagggtgaatctggtgctccaggagct
ccaggagcccaaggtcctcctggtctccagggcatgcctggagagcgtggtgctgccggt
ctgccaggccttaagggcgacagaggtgatcacggtgccaagggcacagatggtgcccct
gggaaggatggcattcgcggtatgaccggccccattggtcctcccggccctgctggtgct
cctggtgacaaaggtgagactggtccttctggtcctcttggtccttctggtgcccgcggt
cctcctggtgagcgtggtgagactggtgctgttggacctgctggattcgctggacctcct
ggtgctgatggtgccctcggtgccaagggagagcccggtgacaatggtgctaaaggtgac
gctggtacccccggacctcctggacctactggtgcccctggcccccagggtgctgttggt
tctactggacctaaaggtactcgtggagctgccggacctcctggtgctaccggattccct
ggtgctgctggccgagttggacctcccggtccttctggtaacgccggccctcctggtcct
tctggacctcctgggaaggagggacagaagggtgtccgcggtgaaactggccctgctggt
cgcactggtgaagtcggtgctgccggtgcccccggtactcccggtgagaagggtgccccc
ggttccgacggcccccctggctcttctggtatccccggacctatgggtatcgctggacag
cgtggtatcgttggtctccctggacagagaggcgagcgcggattccctggtctctctggc
ccatctggagagcctggaaagcagggatccaatggacccagtggtgaacgtggacctcct
ggacccatgggcccacctggacagtctggtgctcctggtgaacctggtcgtgagggcact
cctggtaccgagggtcctgctggccgtgatggagccgccggcgccaagggagaccgtggt
gagaccggtgcttctggtcccaatggcccccctggtcctcctggtgcccctggtcccgtt
ggccctgctggaaagaccggtgaccgtggagagactggacctgctggtgtttctggcgcc
cttggccctccaggacctcgtggccccgctggccctgctggtgcccgtggtgacaagggt
gagactggagaagctggtgagagagggatgaagggacaccgaggcttcactggtctgcag
ggaccccctgggccttctggacccagtggtgaccaaggacctgctggagcttctggtccc
gccggaaccagaggacctgctggcagtgctggctctcctggtaaagacggcatgaacggt
ctgcccggacctatgggacctcctggaccccgtggtcgtactggtgaaattggacctgct
ggtcctcctggacctcctggacctactggacctcctggagcacctggcggcggattcgac
atgggctttattagccagccagcccaggagaaggcaccagatcccttccgcctctaccgt
gctgatgatgccaatgtgatgcgcgaccgcgacctggaagtggataccaccctcaagtcc
ttgagccagcagattgaaaacatccgcagccctgatggcaccaagaagaaccctgctcgc
acctgccgtgacctgaagatgtgccatcctgactggaagagcggtgaatactggattgac
cctgaccagggctgtcctcaagatgccattaaagtctactgcaacatggagacaggcgag
acctgcgtctacccaattgaggctgaggtacccaagaagaactggtacacaagcaagaac
gccaaggagaagaagcacgtctggttcggagaggcaatgactgatggcttccagtttgag
tacggtggccaagactccaaggttgaggatgtcaacattcagctgaccttcctgcgcctg
atgtccactgaggcctcccagaacatcacataccactgcaagaacagcattgcctacatg
gaccagcaggctgggaacctgaagaaggccctgctcctgcaaggatctaacgagatcgag
atcagagccgagggcaacagccgcttcacatacagcgtcgctgaggatggctgcacgtca
cacactggcacatggggcaagacagtcattgactacaagacaacgaaaacatcacgcctg
cctgttattgacatcgctcctatggacgttggtgcacccaatcaggaatttggcattgaa
attggcccagtttgcttcttgtaa
DBGET
integrated database retrieval system