Paramormyrops kingsleyae: 111860879
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Entry
111860879 CDS
T05788
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111860879 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pki03041
]
111860879 (ddx46)
Enzymes [BR:
pki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111860879 (ddx46)
Spliceosome [BR:
pki03041
]
Complex A
U2 snRNP components
U2 related factors
111860879 (ddx46)
Complex B
111860879 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
111860879
NCBI-ProteinID:
XP_023700748
Ensembl:
ENSPKIG00000010351
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPDKRSKRDDRGSSRNRERDRSRRDRSRSRDRRRS
RSRDRKRPRRSRSRERRRSRSRERRRSTSRGRGRRSRSATPTRSRKSDNRSKSKEKSDTT
EQSVEKKKIKEEKEEEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKE
LEEMKQGKKWSLEDDDDDDEEASAPPEPEEEQEKSVEVAVPMEVPEEEELDPLDAYMEEV
KEEVKKFNMGTMKGANDKKGGMTVTKVLTVVTTKKAPNTTKKKGELMENDQDAMEYSSEE
EEVDLQTALTGYQTKQRKVLEPVDHQKIEYEPYRKNFYVEVPDLAKMTQEEVNVYRLELE
GITVKGKGCPKPIKTWVQCGISMKILSALKKHSYEKPTPIQAQAIPAIMSGRDLIGIAKT
GSGKTIAFLLPMFRHILDQRPLEESEGPIAVIMTPTRELALQITKECKKFSKPLGLRVVC
VYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLDEADRMFDMG
FEPQVMRIVDNIRPDRQTVMFSATFPRAMEALARRILSKPVEVQVGGRSVVCSDVEQHVI
VIEEENKFLKLLEILGHYQEKGSVIIFVDKQEHADALLKDLMKASYPCMSLHGGIDQYDR
DSIINDFKNGACRLMVATSVAARGLDVKQLILVINYNCPNHYEDYVHRAGRTGRAGNKGY
AYTFITEEQVRYAGDIIKALELSGSTVPPDLEQLWLNFRDQQKAEGKSIKSSSGFSGKGF
KFDETEHALANERKKLQKAALGLQDSDDEDTALDIDEQIESMFNSKKRVKDLSAPGGGGG
GGAGGTAGATAAAGLLAGIAMPSAGNIQKLELAKKLAIKINAQKNLGAEAQDVMQQATNA
ILRGGTIMAPSVSAKTIAEQLAEKINAKLNYIPVEKMEEERQIAEQTETIKRYEEELEIN
DFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQ
KAKAEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggacgggaatcgaggcattaccggaaacggtcagcctcgcggggccgctcgggaagc
cgatcgaaaagccgctctccggacaagcgatccaagcgtgatgaccgcggcagctctcgc
aaccgcgaacgggaccgaagtcgccgggatcggtcccggagtagggaccggcgccgctca
cgctccagggacaggaagcgtcctaggcgctccaggagccgagagagacggcggtctcga
agtcgtgaacgcaggcggtctaccagcaggggccggggtcgtaggtcgcggtctgcaacc
cctactcggagcaggaagagtgacaacagatcaaagagtaaagagaagtcagacaccaca
gagcaatcggtagaaaagaagaaaataaaagaggagaaagaggaagaaaaagtcgaggat
caagacttcgatcagaacaagctggaggaggagatgaggaagaggaaggagcgggtggag
aagtggagggaggagcagcggaagaaggcgatggagaacatcggggagctgaagaaggag
ctggaggagatgaagcagggcaagaagtggagtctggaagatgacgacgacgacgacgag
gaagcttcagctcctccagagccagaagaggagcaagagaagagcgtggaagtagccgtg
cccatggaggtgccggaagaagaggagcttgaccccctggatgcctacatggaggaggtg
aaggaggaggtgaagaagttcaacatggggaccatgaagggagccaatgacaagaaggga
ggcatgacggtgaccaaggtgttgacggtggtcaccaccaagaaagcgccaaacaccacc
aagaagaagggcgagctgatggagaatgaccaagatgccatggagtactcctccgaagaa
gaggaggtcgatctgcagacagctctgacaggctatcagactaagcagaggaaggttctg
gagccagtagaccatcagaagatcgagtatgaaccctaccgcaagaacttctacgttgag
gtgccagacctggccaagatgacacaagaagaggtcaatgtgtacaggttggagctggaa
gggatcaccgttaagggcaaaggctgtcccaaacctatcaagacatgggtgcagtgtggc
atctccatgaagattttatctgcgcttaaaaagcacagctacgaaaaaccgacacccatc
caggcccaggccatcccagccatcatgtccggccgggacctgatcggcatcgccaagacg
ggcagcgggaagaccatcgccttcctcctgcctatgtttcgtcacatcctggaccagagg
cccctggaggagtccgaaggtcccatagctgtgatcatgacccctaccagagagctggct
ctgcagatcaccaaggagtgcaagaaattctccaaacctctggggctgagagtggtctgc
gtctacggtggcaccgggattagtgagcagattgccgagctgaagcgaggagccgagatc
attgtgtgcacaccagggcggatgattgacatgttaggcgcaaacagcggtcgagtgaca
aaccttcgcagagtcacgtatgtggttctggatgaagcagacagaatgtttgacatgggg
ttcgaaccacaggtgatgcgcatcgttgataacatccggcccgacaggcagactgtcatg
ttctccgccacgttcccccgagctatggaggctctcgctcgtaggatcctgtccaaaccc
gtcgaggtgcaagtcgggggccgcagtgtcgtgtgctccgacgttgaacagcatgtgatt
gtgattgaggaggagaacaagtttctgaagctgctagagatccttggccactaccaagag
aagggctcagtcatcatctttgtggacaagcaggagcatgcagatgctctgctcaaagac
ctgatgaaggcctcatacccctgcatgtctctccatggaggaatcgaccagtatgacagg
gacagtatcatcaatgacttcaaaaacggggcatgccggctgatggtggccacgtctgtg
gcggcccgaggcctggatgtcaagcagcttatcttggtgatcaactacaactgccctaac
cactacgaggactatgtacaccgagctgggcggactggtagagcagggaacaaaggctac
gcatacacgttcatcacagaggagcaggtccggtacgctggggacatcattaaagctctg
gagctctctggatccactgtgccccctgatctggaacagctgtggttgaacttcagagat
cagcagaaagccgagggcaagagcatcaaaagcagcagcggattctccgggaaggggttc
aaattcgacgaaacggagcatgccctagccaacgagagaaagaagttgcagaaagctgct
ctgggtctgcaagactctgacgatgaagacacagctctggatattgacgagcagattgaa
agcatgttcaactccaagaagcgcgtgaaggacctgtccgctccaggagggggtggcgga
ggtggtgccgggggtacagctggcgcaacagccgcggcaggccttctggctggaattgcc
atgccatctgcaggaaacatccagaagctggagcttgctaagaagctggcgatcaagatc
aatgctcaaaagaacttgggcgctgaagctcaggatgtgatgcagcaggctaccaatgcc
attcttcgtggagggaccatcatggctccctccgtttcggctaaaactatcgccgagcag
ctggcagagaagatcaatgctaagctcaactacattccagtggagaagatggaggaggaa
aggcagattgccgaacagacagaaaccatcaaacgatatgaagaagagctggagatcaat
gactttccacagacggcccggtggaaggtcacctccaaagaggccctgcagaggattggc
gagtattcagaggcagccattaccatcagaggaacctacttcccacctggcaaagaacct
aaggagggagaacgcaagatctacctggccatcgagagtgccaatgaactggctgtacag
aaggcaaaggcggaaatcaccagacttattaaagaggagctcatccgattgcaaaactcc
taccagccaaccagcaaaggaagatacaaggtcttgtag
DBGET
integrated database retrieval system
