Pipistrellus kuhlii (Kuhl's pipistrelle): 118726392
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Entry
118726392 CDS
T07682
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl04151
PI3K-Akt signaling pathway
pkl04510
Focal adhesion
pkl04512
ECM-receptor interaction
pkl04611
Platelet activation
pkl04820
Cytoskeleton in muscle cells
pkl04926
Relaxin signaling pathway
pkl04933
AGE-RAGE signaling pathway in diabetic complications
pkl04974
Protein digestion and absorption
pkl05146
Amoebiasis
pkl05165
Human papillomavirus infection
pkl05205
Proteoglycans in cancer
pkl05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118726392 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118726392 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118726392 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118726392 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
118726392 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
118726392 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
118726392 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
118726392 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
118726392 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
118726392 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
118726392 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
118726392 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pkl00536
]
118726392 (COL1A1)
Glycosaminoglycan binding proteins [BR:
pkl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118726392 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
118726392
NCBI-ProteinID:
XP_036307009
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEDIPSVTCVQNGIRYHDREVWKPEVCLICVCD
NGKVLCDDVICEDTKHCPGAVAPPGECCPVCPDGEVSPTDLETAGVEGPKGDTGPRGPRG
PAGPPGRDGIPGQPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSGGGVSVPGPMGPSGPR
GLPGPPGSPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPP
GPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGVPGQMGPRGLP
GERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGSRGSEGPQ
GVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGAP
GPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPAGLPGPPGER
GGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSP
GPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAV
GPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGAPGDL
GAPGPSGARGERGFPGERGVQGPPGPAGPRGSNGAPGNDGAKGDAGAPGAPGSQGAPGLQ
GMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGETGPS
GPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPAGPAGPA
GPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGK
GPRGETGPAGRPGEVGPPGPPGPAGEKGSPGSDGPAGSPGTPGPQGIAGQRGVVGLPGQR
GERGFPGLPGPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRD
GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPAGARGPT
GPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSP
GAAGKDGLNGLAGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFMPQPPQE
KAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHS
DWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPTVAQKNWYVSKNPKEKKHVWFG
ESMTGGFQFEYGGQDSDPADVAIQLTFLRLMSTEASQNLTYHCKNSVAYLDQQTGNLKKS
LLLQGSNEIELRSEGNSRFTYTVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAPLDI
GAPDQEFGMDVGPVCFL
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagacatcccatccgtcacctgcgtgcagaacggc
atccggtaccacgaccgggaagtgtggaagcccgaggtctgtctgatctgcgtctgcgac
aatggcaaggtgttgtgcgatgacgtgatctgcgaggacaccaagcactgccccggcgcc
gtggcccccccgggcgagtgctgcccggtctgccccgacggcgaggtgtcgcctacggat
ctagaaaccgcaggagtcgagggacccaaaggagacaccggcccccgaggccccagggga
cccgcaggcccccctggccgagatggcatccccggacagcctggaccccccggcccccct
ggaccccctggaccccctggcctcggaggaaacttcgctccccaaatgtcttacggctat
gatgagaaatcaggcggaggagtgtccgtgcccggtcccatgggtccctctggtccccgc
ggtctccctggcccccctggctcacctggtccccaaggtttccaaggcccccctggtgag
cctggcgagcctggagcttcaggtcccatgggtccccgtggtcctcctggcccccctggc
aagaacggagatgatggcgaagctggaaagcctggccgccccggcgagcgtgggcctcct
gggcctcagggtgctcggggattgcccggaacagctggtctccccggaatgaagggacac
agaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggtcccaagggt
gagcctggtagccctggtgagaatggagttcctggccagatgggcccccgtggtctgcct
ggtgagagaggtcgccctggagcccctggccctgctggtgctcgtggaaatgatggtgct
actggtgctgctggaccccctggtcccactggtcctgctggcccccctgggttccccggt
gctgttggtgctaagggtgaagctggtccccaaggatcccgaggctcggaaggtccccag
ggcgtgcgtggcgaacccggaccccctggccccgctggtgctgctggccctgctggaaac
cctggtgctgatggacagcctggtgctaaaggtgccaacggcgctcctggtattgctggt
gctcctggcttccccggtgcccgaggcccttctggaccccagggccccagcggtgcccct
ggccccaagggtaacagcggcgaacctggtgctcccggcaacaaaggagacactggcgcc
aagggagagcccggccccactggtattcaaggaccccctggccctgctggagaggaagga
aagcgaggagcccgaggtgaacccggacctgccggcctgcccggaccccctggcgagcgt
ggcggacctggcagccgtggcttccctggcgcagatggtgttgctggtcccaagggtccc
gctggggaacgtggctctcccggtcctgctggccccaaaggctctcctggtgaagctggt
cgccccggtgaagctggtctgcctggtgccaagggtctgactggcagccctggcagccct
ggtcctgatggcaagactggtccccctggtcccgctggtcaagatggccgccccggaccc
ccaggcccccctggcgcccgcggtcaggccggtgtgatgggattccctggacccaaaggt
gctgctggagaacccggcaaagctggagagcgaggtgttcccggaccccctggcgctgtg
ggtcctgctggcaaagacggagaagctggcgctcagggagcccctggccccgctggcccc
gctggtgagagaggtgaacaaggccccgctggctcccccggattccagggtctccctggc
cccgctggtcctcccggtgaagcaggcaaacccggtgaacagggtgctcctggagacctc
ggtgcccccggcccctctggagcaagaggcgagagaggtttccctggagagcgtggtgtg
caaggtccccccggccctgctggtccccgcggatccaatggtgcccccggcaacgatggt
gctaagggtgatgctggtgctcctggagcccccggcagccagggtgcccctggcctccag
ggaatgcctggtgaacgaggcgctgctggtctgccaggccccaagggtgacagaggcgat
gctggtcccaaaggtgctgatggtgctcctggcaaagatggcgtccgaggtctgactggt
cccattggtcctcctggccccgctggtgcccctggtgacaagggtgaaactggtcctagc
ggccctgctggtcccactggagcccgtggcgcccccggagaccgtggtgagcctggtccc
cctggccccgctggcttcgctggcccccctggtgctgatggccaacctggtgctaaaggc
gaacccggtgacgctggtgctaaaggtgatgctggtcccgctggccctgccggccccgct
ggtccccccggccccattggtaacgttggtgctcctggacccaaaggcgcccgcggcagc
gctggtccccctggtgctactggtttccctggtgctgctggccgcgtgggtccccccggc
ccctctggaaacgctgggccccccggccctcctggccccgctggcaaagaaggcggcaaa
ggcccccgcggtgagaccggccccgccggacgtcccggtgaagttggtccccccggcccc
cctggccctgctggcgagaaaggatcccctggctctgatggacccgctggctctcccgga
acccctggaccccaaggcattgctggacagcgtggtgtggtcggcctgcccggtcagcga
ggagaacgaggtttccccggtctccctggcccctctggcgaacctggcaaacaaggtccc
tctggctccagtggcgaacgtggcccccctggtcccatgggcccccctggattggctgga
ccccctggcgagtctggacgtgagggatctcctggtgctgagggctcccccggacgagat
ggatctcctggccccaagggtgaccgtggtgagaccggccctgctggaccccctggtgct
cctggcgctcctggtgcccctggccccgtcggccccgctggcaagagtggcgaccgtggt
gagactggtcctgccggtcccgccggccccatcggccccgctggtgcccgtggccccact
ggaccccaaggcccccgaggtgacaagggtgagacgggcgaacagggcgacagaggcatc
aagggtcaccgtggtttctccggcctccagggtccccctggcccccctggttctcctggt
gagcaaggtccctctggagcttctggtcccgctggtccccgtggtccccccggctctccc
ggtgcggctggcaaagatggtctcaacggtctcgccggccccatcggaccccccggcccc
cgtggtcgcactggtgacgctggccctgttggtccccccggccctcctggccctcctggt
ccccctggtcctcccagcggcggtttcgacttcagcttcatgccccagccacctcaggag
aaggcacacgacggcggccgctactaccgggccgatgacgccaacgtggtccgtgaccgt
gacctcgaggtggacaccaccctcaagagcctgagccagcagattgagaacatccggagc
cccgagggcagccgcaagaaccctgcccgcacctgccgcgacctcaagatgtgccactcc
gactggaagagcggagaatactggattgaccccaaccaaggctgcaacctggacgccatc
aaggtcttctgcaacatggagacgggcgagacctgcgtgtaccccacacagcccaccgtg
gcccagaagaactggtacgtcagcaagaaccccaaggagaagaagcacgtctggttcggc
gagagcatgaccggcggattccagttcgagtacggcggccaggactccgaccctgccgac
gtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccagaacctcacc
taccactgcaagaacagcgtggcctacctggaccagcagaccggcaacctcaagaagtcc
ctgctcctccagggctccaacgagatcgagctccgctccgagggcaacagccgctttacc
tacactgtcacctacgacggctgcacgagtcacaccggagcctggggcaagaccgtgatc
gaatacaaaaccaccaagacctcccgcctgcccatcatcgacgtggcccccttggacatt
ggcgccccagaccaggaattcggcatggacgttggccccgtctgcttcctgtag
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