Pipistrellus kuhlii (Kuhl's pipistrelle): 118731667
Help
Entry
118731667 CDS
T07682
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkl03019
]
118731667 (TNRC6A)
03036 Chromosome and associated proteins [BR:
pkl03036
]
118731667 (TNRC6A)
Messenger RNA biogenesis [BR:
pkl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118731667 (TNRC6A)
Chromosome and associated proteins [BR:
pkl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118731667 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118731667
NCBI-ProteinID:
XP_036316289
LinkDB
All DBs
Position
Unknown
AA seq
1949 aa
AA seq
DB search
MRELEAKATKDVERTLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNQQQPQPPQQQPQQPQPQQPQPPQALPRY
PREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSESSALTNQQPQNNGEVQNS
KNQSDTNLNASESHYENSQRGPVSSSSNSNTDSKDAVVNNSPEKEAWPLVPGSDPELASE
CMDADSASSSESERNITIMASGSTGGEKDVLRNSTGLGSQNKFVVGGSSNSLGRGSSTGP
WGFSHGAVISTCQVSVDAPESKSESSNNRVNAWGTVSSSSNGGVNPSTLTSASNHGAWPV
LENNGLALKGPVGSSSPGISIQCSTIGQMPNNQSINSKVGGSSTHGTWGSLQETCESEVS
GTQKISFSGQPQNITTEMAGPNNTTNFMTSSLPNSGSVQNNELPSNAGAWRVSTMNHPQI
QVPSVMNGTSLPHLSNGESKSAGSYGTTWGAYGSNYSGDKCASPDSQADGDTVNTTLMQP
GMNGPVGTNFSGNANKGGGLWESGPTNSQGASWGSGNGANLGGSRRGWGTPAQNTGTNVP
SVEWSKLPGNQHSSDSANGNGKKFTNGWNSTEEEDQGSATSQTNEQNSMWAKTGGTVDSE
GSTESTGRLEEKVTGETQSRDRRRIDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTA
WDTETSPRGERKTDNGTEAWGSSATQTFNSGACIDKTSPNSNDTSSISGWGDPKPILRWG
DSKGSSCQGGWEDDSAATGMIKSNQWGHCKEEKPMWNDSQKNKQGWGDGQKSNQGWSVSA
SDNWGDTSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDES
SKPNSSQGWGDPPKPSQSLGWGDSAKPISSPDWNKQPDMVGSWGVPPAPGKPSGTGWLGG
PIPAPAKEEEPTGWEEPSPESIRRKMDIDDGTSAWGDPSKYNYKNVNMWNKNVPNGGSRS
DQQAQVHQLLPSASAISTPEAGGGSGWGEPWGEPSTPATTVDNGTSAWGKPIDSGPSWGE
PIAVASNTSTWGSSSVGPQAISKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVEIGMWN
SNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEEAWINPFVKQFSNISF
SRDSPEENVQSNKMDLPGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQMPKESSMER
SPYFDKDGIVADESQNLQFMSSQSMKLPPSNSALPNQALGSIAGLGMQNLNSVRQNGNPS
MFGVGNTAAQPRGLQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLF
GPQQVAMLNQLSQLNQLSQISQLQRFLAQQQRTQSQRSVPSGNRQQQDQQGRPLSVQQQM
MQQSRQLDPNLLVKQQTPPSQQQSLHQPAMKSFLENVLPHTTSELQKGPSPVNAFSNFPI
GLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVP
YDFMNSSTSPASPPGSVGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVT
PGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSSTAQSTS
ARSSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLR
VGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLN
LPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQSQSLTPSPGWQ
SLGSSQNRLGSLDCSHPFSSRTDLSHWNGAGLAGTNCGDLHGTSLWGTPHYSTSLWGPPS
SSDPRGMSSPSPINAFLSVDHLGGGGESM
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagcgaccaaagacgtagagaggactcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaaacgagccacagccaacaatcagcagcagccgcagccgccacag
cagcagccacagcagccacagccacagcagccgcagccaccacaggccttgcctcggtat
cctcgtgaagtaccaccacgattccgccaccaggaacataagcagcttctaaagaggggt
cagcattttcctgtcatagcagcaaacctgggatctgctgttaaagtgttaagcagccag
tcagaaagcagtgctttaacaaaccaacagccacaaaataacggagaggtgcagaacagc
aaaaaccagtcagatactaacctcaacgcttccgaatctcattatgaaaattcacagcgg
ggacctgtgtcatcttcgagcaactccaacacagactctaaggatgctgttgtaaacaac
tcccctgagaaagaagcatggcccttggtccctggcagtgatccagagttggcttcagaa
tgcatggatgctgattctgcctccagttctgaatcagaaagaaacatcactatcatggct
tcagggagcacaggtggtgagaaagatgtccttcgaaacagcactggacttggttcccaa
aacaagtttgtggttggcggcagcagcaatagtttgggtcgtggaagtagtactgggccc
tggggcttctcccatggagccgtgataagcacatgtcaggtctctgtggatgctcctgaa
agcaaatcagaaagtagcaacaatagagtgaatgcttggggcactgtaagctcttcatca
aatggaggggtaaatccaagcactttgacttcagctagcaaccatggtgcctggccagta
ttagagaacaacggacttgccctaaaagggcctgtggggagtagtagtcctggcatcagt
attcagtgcagtaccataggccagatgcctaacaatcagagtattaactctaaagtgggt
ggttcttctacccatggtacctggggaagccttcaggaaacttgtgaatctgaagtaagt
ggtacacagaagatttcattcagtggtcaacctcagaatatcaccactgaaatggctgga
ccaaataacactactaactttatgacctctagtttaccaaactccggttcagtacagaat
aatgagctgcccagtaacgcgggggcctggcgtgtgagcacaatgaatcatcctcagata
caggttccatcggttatgaatggcacttcccttcctcaccttagcaacggggagtcaaaa
agtgcaggctcttatggtactacctggggtgcctatggttctaactactctggagacaaa
tgtgcaagccccgacagccaggctgatggtgacactgtgaacacaactctgatgcagcct
ggcatgaatgggcctgtgggcacgaacttttcaggcaacgcaaataaaggaggaggcctc
tgggagtctgggcccacaaattcccagggtgcatcctggggaagtggaaatggtgcaaac
ttgggaggaagtcgaagaggatggggaactcctgcacagaacactggcactaatgtaccc
agcgtggagtggagcaaactgcctggcaatcagcattccagtgacagtgcaaacggcaat
ggtaagaagtttacaaatggatggaattctactgaggaagaggatcagggttctgccaca
tctcagacaaatgagcaaaacagcatgtgggccaaaacaggaggtacagtggacagcgaa
ggtagcacagagagcactggacgcctcgaagaaaaagtaactggggagactcagagtaga
gacagaagaagaattgatcagcacacattactccaaagcattgttaacagaactgactta
gatccacgtgtcctctccaactctggttggggacagactcctattaagcagaatactgcc
tgggatactgagacatcacctagaggggaaagaaagactgacaatgggacggaggcttgg
gggagctctgcaacacagacttttaactcaggggcgtgtatagacaagactagccctaac
agtaatgatacctcatctatatcggggtggggagatcccaagcctattctgaggtgggga
gattccaaaggctcaagctgccaggggggatgggaagatgattctgctgctacaggaatg
atcaagagcaatcagtgggggcattgcaaagaagagaagcccatgtggaatgattcacaa
aagaacaaacagggctggggtgatggacagaagtcaaaccaagggtggtctgtttctgcc
agtgataactggggagacacgtcaaggagtaaccattggggtgaagctaataaaaaatct
agctcaggaggtagtgacagtgacaggtctgtttctggttggaatgaacttggtaaaact
agttcttttacgtggggaaataatataaatccaaataattcatcaggatgggatgaatct
tctaaacctaactcttcccaggggtggggagatcctccaaagcctagtcagtcgctgggt
tggggagattcagcaaagccaatcagctctccagactggaacaagcaaccagacatggtt
gggtcttggggagtccctccggctccaggcaaaccctccggtacaggctggctgggagga
ccgattccagccccagccaaagaagaagaacccacaggctgggaggaaccatccccggag
tccatacggcgcaaaatggacattgatgacggaacctcagcttggggggatcccagcaaa
tacaactataagaatgtgaacatgtggaacaaaaatgtcccaaatggcggcagccgctca
gaccagcaagcacaggtgcaccaactgctgccatctgcaagtgccatctcaaccccagag
gcaggcggtggttccggctggggtgagccctggggggagccttctactccagccacaact
gtggataatggtacttccgcgtgggggaaacccatagacagtggtcccagctggggggaa
cccatcgctgtggcatccaacacgtccacgtggggctccagctctgttggtccacaagcg
ataagcaaatctggaccaaaatctatgcaagatggctggtgtggtgatgatatgccattg
cctggaaatcgccccactggctgggaagaggaagaggacgtggagattggaatgtggaat
agtaattcatctcaagagcttaactcgtctttaaattggccaccatatacaaagaaaatg
tcatcgaagggtctgagtggcaaaaaaaggagaagggaaaggggaatgatgaagggtgga
aacaaacaagaagaagcatggataaatccatttgttaaacagttttcaaatatcagtttt
tcgagagactcaccagaagaaaatgtgcagagcaataagatggaccttcctggaggaatg
ttacaagacaaacgaatggagatagataaacatagcctaaatattggtgattacaatcga
acggtcgggaaaggccctggttctcggcctcagatgcccaaagagtcttccatggagcgc
agcccttattttgataaggatggcattgtagcagatgaatcccaaaacttgcagtttatg
tccagtcagagcatgaagcttcccccttcaaatagtgcactacctaaccaggccctcggc
tccatagcagggctgggtatgcaaaacttgaattctgttagacagaatggcaatcccagt
atgtttggtgttggaaacacagcagcacaaccccggggcctgcagcagcctccagcacaa
cctctcagttcatctcagcctaatctccgtgctcaagtgcctcctccattactctcccct
caggttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaatccgctcttt
ggccctcaacaggtagccatgctgaaccagctctcccaactcaaccagctttctcagatc
tcccagttacagcggtttttagcacagcagcaaaggacgcagagtcagagaagcgtgcct
tctgggaaccggcagcagcaagaccagcagggtcgacctcttagtgtgcagcagcagatg
atgcaacagtctcgccaacttgatccaaacctgttggtgaagcagcagacgccaccatct
cagcagcagtcactccatcagccagccatgaaatctttccttgaaaatgtcctgccccac
actacatctgagctgcaaaaagggccatctccagtaaatgctttcagcaacttccctata
ggcttgaactcaaacttgaatgtaaatatggatatgaacagtattaaagagccacagtca
agactaaggaagtggactacagtggacagcatttctgtgaacacatctttggatcaaaac
tccagcaaacatggtgctatttcaagtggtttcaggctggaagagtctccgtttgttcct
tatgacttcatgaacagcagtacttcgccagccagccctccaggctcagtgggagatggc
tggccacgtgccaaatcgcccaatggctctagcagtgttaactggccaccagaatttcgc
cctggtgaaccatggaaaggttatccaaacattgacccagaaactgacccttacgtcact
cctggcagtgtcatcaacaatctttcaattaacactgtgcgggaagttgaccacctcagg
gacaggaacagtgggtcatcctcatccttgaacaccacgctgccttcaactagtgcctgg
tcatccattcgtgcctccaactacaacgttcccctcagcagtacagcacaaagcacttca
gccagaagtagtgattccaaattgacgtggtctccggggtcagtcacaaacacctctctg
gcccatgagctgtggaaggtccctttgccacctaaaaacatcactgctccatcccgtcca
cctccggggctcactggccagaagcctcccttgtctacgtgggataattctcctcttcgt
gtaggtggaggatggggaaattctgacgccaggtataccccagggtccagctggggtgag
agcagctcagggagaataacaaattggcttgttctaaaaaacctcacacctcagatcgac
ggctcgactctgcgcaccctgtgcatgcagcatggccccctgataacattccacctgaac
ctcccgcacggaaacgctttggtccgctacagctcgaaggaagaggtagtgaaggcacag
aagtctctgcacatgtgtgtgctggggaacactactattctcgctgagtttgccagtgaa
gaggagatcagtcgtttctttgcacaaagtcagtctctgaccccttcccctggctggcag
tccctcgggtccagccagaaccggctgggctccctcgactgttcccacccgttctccagc
cggactgatctcagtcactggaatggtgctgggctggcggggactaactgtggagacctc
catggcacttccctttgggggaccccccactattccacaagcctgtggggccctccaagc
agcagtgacccccgaggaatgagcagcccctcccccatcaatgcttttctttctgttgac
cacctcggcgggggtggagagtccatgtga
DBGET
integrated database retrieval system
