Plasmodium knowlesi: PKNH_0102800
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Entry
PKNH_0102800 CDS
T01094
Name
(RefSeq) SICAvar, type I
Organism
pkn
Plasmodium knowlesi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SICA_beta
SICA_C
SICA_alpha
DUF1937
Motif
Other DBs
NCBI-GeneID:
7318528
NCBI-ProteinID:
XP_038969361
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All DBs
Position
1:159927..174554
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AA seq
2250 aa
AA seq
DB search
MATAVAGGVGGAGGGGGGGGNGGRSSSLMEAWLEKLKGDGELSGSAEEITTKLKKNLEDE
WEELKTSLEQPGSTEISSLCASVGSLVEGVWTDQKEAYLKNLCKGIVEIKYFMSGVETKR
EDKGRGGKDETAQIKQLTDAQAYPRCIVGSVALNELYGDHCKLDGIIGEISTTMNNKLRG
YPTQNGQSAEDQLNKCQGITKEQLFIGKSIIGNTIKLWAEGDRAKEERKKSRDQTGGALR
VGYVWRYWPNVCGGKGKQKEEQHLRELRRNNAKHMMSFLTVGDDNMSSGADTDGKPTLGE
ILTDDSYTVEKDQLNSVLSVLVEGSTGEVDTSKLPTLMQTLETISKETKAQECIQNNKDN
VDNNNSFASTGKLCNRLQCIQNYLNTTGTTPAGKAAEAALWNDVQTQVTKLATTVSNNVG
SDSDADGLCKDVKCPNDGEEECVSKTTCNIMAKALKEVYKKGEADQEDYRIFYPTLRCVI
LNAFADKLKDRANEGGYACAVEEGIEGAFAAAQEKNKYKEWCNGNGKNDGSCQPCGKQHQ
VCTAYSIKGTTSLVSKVMNELNKNTTNIQKTLSEISNKVSLCDRMNCIIKQWIDNNTSGA
TTPGAATTRGVSTTNTDQFWGEKGDVMKLWNELAKKMKETNGKVNGQCDLFATDAEKWAC
KYLHAGFTELKSISSSITTNAGAYETLHKDPSFVQTMGCFLLHSYAKYMKDKATCNIEKG
ITQAFESWNVSSNGNCSGTEPCVPCQWNGKDHESCTIKTNGSTDPNYKVEEKLKDIVNED
KDTKIKEMLSNINKRTTLCDHMKCIASHLSSTNGQQKQSNTSADEFWGEAGDVKNLWKKL
VEEMKENGKTDQNECNQVNDNGTKRDAIHSEKTACNYLHVGFTKLKDITESINSKSNDYP
TLHKDPSFAQTVGCFLLHSYAEHMEKKSTCVITAGIEKAFTTAGKIGSDVTCQWNKSDYE
KCKINTNGGSGIPTQTEVKNKLKEIVTENDPKIKTMAEAVNKMDLCDQVKCVAARWRKEK
DTSGSPPRDWKKVWEGEDGVKKELGELSKKMKEKTDAASYCTMDEGKGKEACLLIAAGLK
NLYNTTTADDLTASFQRTMQCVLLNAIADKLESDELPCKDEKSVQAGINHAFGTENDNIR
SGVSTCKDDVKCFKCVREKNLMSCTLNNDDKNVKEKVEPMLKANDTFKKESLEKTICKPC
TGEGKKDFCQELNCVVDKWGERKNGSSSGTTTWDDMKSDLEKELNSLLSAMKTNQTAVVD
HCNNSDWKKDDAAGDANKTACKLVAAGLQHISKIQESHSTIQHKPYDNQEFKQLVSCLML
KAVVQKMKEDSKICDIEPGIRVAFAKAGTIKTAHCKNDKPCIVCNWSDGDYNQLNNCKIG
TGNINVKDKLDSLLKETKHQTKVEETLQDLLKTDKSDTLCPRLQCLASKVKLSGNEDKFW
TNDGDVGNLWKELAKEMNTKGTEEQSSCSTVDTSRTPTDPERRACNHLTAGFNQLKKDPT
SNGSDYPILKDNRLLRQTVGCFLLKEYAKQLQKDSKCVIEAGLKKAFQNNKSSCTNNASC
IECEWDENLENCDLKIGSDNKKLNEKFNELLKQNKDNNLEENLKKINHMDNLCDYIKCAA
PKWFHNQNNSKAGSTGNPTKTWCDFWDTTVKDALEEMFKEIDQNGKDKSKTNKNVVCKAF
GDDNPNSVERKACNHITAGLEYIKNITGSGSTTPKNGHQDDDKFFKQSMMCAALNLYADK
IKEQTDNICPIDEKRIEKMFDDWNKQNNPNSSPSPSCKSGVYDCFVCKRDDKILDGCNLL
VDKGLIGKSTPSQPKGNCNDNDENKKVQEKMTNLLQTEPKMDETLMNINEMKSSFCTQVQ
CAIKKKLRSNNVQTPSTGTTQPWNALSDEIGKELTELLKDMNDAKKQSDAAKYCNDDNLP
WNTKGHTERRTNRAACLHFAAGLKHIYGHGNGHVNGRSHGQQGGHVNGPSFEQTMGCLFL
KEYAKQLQKVAEVKKQGNSWVHPYCEIDKGINYAFSRSENIMKETSPCKDTNGTNDCFVC
IQKEDDYNNCKIGNDDIGNEATEQFKNESKQKLMQETLENTVCPILITDLLTPFLPLAPV
SIGLSAMAYYLWKYFGPLGKGGQRFRRSPAEIPGPSVQEQLLDHVQQDSSHEYRLVKERK
PRSAPTRTKRSGPVNRRTIIEIHFEVLDECQKGDTQLNQKDFLELLVQEFMGSEFIEEEQ
VPKEEVPMESLPMERVSIKEVPSLGSGLMV
NT seq
6753 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcagtagcaggaggtgttggaggcgccggtggaggtggaggtggaggtggt
aatggcggccgtagttcgtccttaatggaagcatggctggagaaattgaagggggatggg
gaattaagtggtagtgctgaggaaattacaacgaaattgaagaagaatttggaggatgaa
tgggaagaattgaagacttccttagagcagccggggtccacggaaatatctagtctgtgt
gcgagcgtggggagcctcgtggagggtgtgtggactgatcagaaggaggcttatctgaag
aatttatgtaaaggaatagtcgaaataaaatatttcatgagtggtgttgaaacaaagaga
gaggataagggtagaggtggtaaagatgagacagcacaaattaagcaactcacggatgct
caagcttatccccgctgtattgttggatccgtcgctctgaacgaattgtacggcgatcat
tgtaaattggatggcattataggggaaatatcgaccacaatgaacaataaattaaggggg
tatcccacgcagaatgggcagagcgctgaggaccaattgaataaatgccaaggaattacg
aaggaacaactattcattggtaaatctattataggcaatacaatcaaactgtgggccgaa
ggggatagggcgaaggaagaaaggaagaagagcagggaccagacaggtggagccctgagg
gtggggtacgtgtggaggtactggccaaatgtctgtggggggaaggggaagcagaaggag
gagcagcatttgcgggaactgagaaggaataatgcgaaacatatgatgtcatttcttaca
gtgggcgatgataacatgagcagtggggccgatactgatggaaaaccgactttaggtgaa
atattaactgacgacagttacaccgtggagaaagaccaactgaattcagtactatcagta
ttagtcgagggcagtacgggtgaagtggacacttcaaaactgccgacactaatgcagacc
ttagagacgatttcgaaggaaactaaagctcaagagtgcatccaaaacaacaaagacaac
gtagacaataacaacagcttcgccagcacgggcaaattgtgcaatcgtctacaatgtata
cagaattacttgaatacaacaggaacgacaccagcaggaaaggcagcagaagcggccctg
tggaacgacgtccaaactcaagttaccaaacttgctacaactgtatctaacaatgtgggg
agcgacagcgatgcagacggtctgtgcaaggacgttaagtgccccaatgatggtgaagag
gagtgtgtgagcaaaacgacatgcaacattatggctaaagcattaaaggaggtatataaa
aaaggggaagcggaccaagaggattatcgaatattctatcctacccttcgttgtgtaata
ttgaatgcattcgcagataaattaaaagatcgggcgaacgaaggtggttatgcttgcgct
gtagaggaaggaatagagggggcctttgctgcagcgcaggagaagaataaatataaggaa
tggtgtaatgggaatggtaagaatgatggttcctgtcagccatgtggaaagcagcatcag
gtgtgtacggcttatagtattaaagggaccacctccctggtgagcaaagtgatgaatgag
ttaaacaaaaacaccaccaacatacaaaaaaccttatccgaaataagtaataaggtctct
ttatgtgatcgtatgaattgtataataaaacaatggattgataacaatacatcaggagca
acgacaccaggagcagcaacgacaagaggagtgtctacgacaaatacggaccaattctgg
ggtgagaagggtgatgttatgaaattgtggaatgaattagcaaagaaaatgaaggagaca
aatggaaaggtgaatggacaatgtgatttatttgcaactgacgctgagaagtgggcatgc
aagtatttgcatgccggcttcaccgaactgaagagcatttcctcgtccataacaactaat
gcaggtgcttacgaaaccctgcataaagacccatcgtttgtccaaacgatgggttgtttc
ttactccattcctatgcaaaatatatgaaagacaaagcaacttgtaatattgaaaagggg
ataacacaggcatttgagtcatggaatgtaagttctaatggtaattgcagtggcacggaa
ccttgtgttccgtgccaatggaatggaaaagaccatgaaagttgcacaattaaaacaaat
ggaagcactgacccaaattacaaggttgaggaaaaattgaaggacatcgtcaatgaggac
aaggacaccaaaataaaggaaatgctatctaacataaataaaaggactactttatgtgac
catatgaaatgtatagcatcccacttaagttccacaaacggacaacaaaaacaatcgaat
acatctgcggacgaattctggggggaggctggcgatgttaagaacttgtggaaaaaattg
gtagaggagatgaaggagaatggcaaaacggatcagaatgaatgtaatcaagtgaatgat
aatggcaccaagagggatgcaattcattctgaaaagacggcatgcaattatttgcatgtc
ggcttcaccaaactgaaggatattactgagtccataaattctaagagcaatgactaccca
accctgcataaagacccatcgtttgcacagacagtgggttgtttcttacttcattcttat
gcagaacatatggaaaaaaaatctacttgtgttattactgctggtatagagaaggctttc
acaactgctggtaagattggtagtgatgttacttgccaatggaataaaagcgactatgaa
aaatgcaaaattaacacaaatggaggcagtggcatcccaacacaaacggaagtaaagaac
aaattgaaagaaattgtcacggagaatgaccccaaaataaagaccatggcggaagctgta
aataaaatggacttatgtgaccaagtcaaatgtgtagcagcccgatggaggaaagagaag
gacacgagcggttcaccaccacgtgattggaagaaagtgtgggaaggcgaagacggtgtg
aagaaggaattaggggaactttctaaaaagatgaaagagaagacggatgctgcatcctac
tgcactatggatgaagggaaaggaaaggaggcttgcctccttatagcagcaggattaaaa
aacctctacaatacaactactgctgacgaccttacggcgtcgttccaaagaacgatgcaa
tgtgttctattaaatgccatcgcagataaattagaaagtgacgaactgccgtgtaaggat
gagaaaagtgttcaggcagggataaatcatgcttttgggacggaaaatgataacattagg
agtggagtatccacatgcaaggatgatgttaagtgttttaagtgtgttagggaaaaaaat
ttaatgagttgcacattgaataatgacgataagaatgtaaaggaaaaagtagaacccatg
ctaaaagcaaatgatacattcaagaaagaatctctggagaagaccatatgtaaaccatgt
actggggaagggaagaaggatttctgtcaagaacttaattgcgtagtagataaatgggga
gaaaggaagaatggaagctcaagcggaacgactacctgggatgacatgaagagtgactta
gaaaaagaactaaattcactcctaagtgccatgaagacaaatcagaccgccgttgtggac
cattgcaacaacagcgactggaaaaaagacgacgccgcgggggacgcaaacaaaactgct
tgcaagctggttgcagcagggctgcaacatatttcgaaaattcaggaatctcactccacg
attcagcataagccctatgataaccaagagtttaaacaattagtttcttgtttaatgtta
aaagccgtcgtacaaaaaatgaaagaagacagcaaaatttgtgacatagaaccgggaatt
agggtcgcttttgcaaaggcaggcactattaaaaccgcacattgcaagaatgataaacct
tgcattgtttgcaattggagcgacggcgactataaccaacttaataattgcaaaattggc
actggcaatatcaacgtaaaggacaaattggattcattgctcaaagagacgaaacatcag
accaaagtcgaagaaaccctccaagacttactcaaaaccgacaaatccgacactctatgt
cctcgtcttcaatgtttagcatcaaaagtgaagttatcaggcaatgaggacaaattttgg
actaatgatggtgacgttggcaatctatggaaagaactggcgaaggaaatgaacacaaag
ggcacagaagaacaatcctcatgcagcacagtcgacactagtagaacacccaccgaccct
gaaaggagggcatgcaaccatcttacagcaggtttcaaccaactgaaaaaggatccaact
tccaacggtagtgactaccccatcttgaaggacaaccgactgttaagacaaacagtgggt
tgttttcttcttaaggaatatgcaaaacaactgcaaaaagactcaaaatgtgttatcgaa
gcaggtttaaagaaagcatttcaaaataataaatcttcatgcacgaacaatgcttcgtgc
attgaatgtgaatgggatgaaaatttggaaaattgcgacttaaagattggcagcgacaat
aagaaacttaatgaaaaatttaatgaattgctcaaacaaaacaaagataacaacttagaa
gaaaacttgaagaaaataaaccacatggataacctatgtgattacattaaatgtgccgca
cccaaatggttccacaaccaaaacaacagcaaagcagggagtactggtaatccaacgaag
acttggtgtgacttttgggatacgactgttaaggacgcactggaggagatgttcaaggaa
atcgatcagaatggaaaggacaaatcaaagaccaacaagaatgttgtatgcaaagcgttt
ggtgatgataatcctaatagtgttgaaagaaaagcatgtaatcatatcacagcaggttta
gaatacattaaaaacattacaggcagtggtagtactacccctaagaatggtcatcaggat
gatgataaattttttaaacaatctatgatgtgcgcagcacttaatctttacgcagataaa
ataaaagaacaaacggacaatatttgtcccattgatgagaaaagaatagaaaaaatgttt
gatgattggaataaacagaataatccaaattcttcgccttcgccttcgtgtaagagtgga
gtttatgattgctttgtctgtaaaagggatgataaaattttggacggttgcaacctcctc
gttgataaaggtctcattggaaaatcaacaccatcacaaccaaaaggaaattgcaatgat
aacgatgaaaataaaaaagtccaagagaaaatgaccaatctcctccaaactgaacccaaa
atggacgaaacattaatgaacataaatgaaatgaaatcttctttctgtactcaagtccaa
tgcgcaataaaaaaaaaactaaggagcaacaatgtacaaacaccctcaaccggaacaaca
caaccttggaatgccttgagcgatgagatcggaaaggaattaacggaacttttaaaagat
atgaacgacgctaaaaagcagtcggacgctgccaaatattgcaatgacgacaacctccca
tggaatactaagggccatacagaaaggcgaacaaatagagcagcttgtttgcattttgct
gcaggattgaagcacatttatggccacggtaatggccatgttaacggccgttcccacggg
caacagggtggccatgttaatggcccatcgtttgaacaaacgatgggttgtttatttctt
aaagagtatgcaaaacaattgcaaaaagtggcagaagtgaagaaacaaggaaatagttgg
gtacatccctattgtgaaatagataagggcataaactacgcttttagcagaagtgaaaac
attatgaaagaaacatctccatgcaaagatactaatggtactaatgactgttttgtctgc
atacaaaaagaagacgattataataattgcaaaattggcaatgacgatataggaaatgaa
gctacagaacagttcaaaaacgaatcgaagcaaaaactaatgcaagaaacattagagaat
acagtctgtcccatccttattacggatctccttaccccttttcttcctttggctcctgtc
tctattggtctttctgctatggcttattacctttggaagtattttggtcctcttggtaaa
ggaggacaacgtttccgaagatctcctgctgaaattcctggtccatcagtacaggaacaa
ctcctcgatcatgtgcaacaagatagttcacatgaatatcgattagtgaaagaacgaaaa
cctcgttctgctccaacaagaacaaaacgttctggtcccgtgaatcgccgcacgattatt
gaaattcattttgaagtgttggacgaatgtcaaaaaggggacacacaattgaaccagaag
gattttctggaacttttggttcaagagttcatgggatcggaatttattgaagaagaacag
gttcctaaggaagaggttcctatggaaagtcttccaatggaacgtgtttctattaaagag
gttccaagtttaggttccgggttaatggtttaa
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integrated database retrieval system
