Pontibacter korlensis: PKOR_10800
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Entry
PKOR_10800 CDS
T03841
Name
(GenBank) recombinase RecR
KO
K06187
recombination protein RecR
Organism
pko
Pontibacter korlensis
Pathway
pko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PKOR_10800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pko03400
]
PKOR_10800
DNA repair and recombination proteins [BR:
pko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PKOR_10800
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PKOR_10800
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Ortholog
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GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_ZnF
RecR_C
Toprim
HHH
HHH_5
PHF5
Motif
Other DBs
NCBI-ProteinID:
AKD03529
UniProt:
A0A0E3ZE88
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All DBs
Position
2463025..2463633
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AA seq
202 aa
AA seq
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MNFPSKLIENAVEELAKLPGVGRKTALRLALHLLKHESEDTLSLAEALVKMRTEVKHCKE
CHNISDTEICSICANPLRDRSLLCIVSDIRDVIAIENTSQYKGLYHVLGGVISPIEGVGP
SDLHIDSLLERLPNSEVREILLAISPTMEGDTTAFYLTRKLRDFNLRITTIARGVPVGGE
LEYTDEVTLGRSIVERTAYGKI
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaattttccgtctaaattaattgagaacgctgtggaggagcttgcgaagctgcccggc
gtaggtaggaagactgcgcttcgactggctttgcacctgctgaagcatgagtctgaagat
actctctcgctggctgaagcgctggtgaaaatgcgcacagaggtgaagcattgcaaggag
tgccataatatttcggacacagaaatatgctctatttgtgccaatccattgcgcgacaga
agcttgctatgtattgtgagcgacattcgtgatgtgattgctatcgagaacacatctcaa
tataagggtttgtaccatgtgttgggaggagtgatttccccaattgagggagtcggcccc
tctgatctgcacatcgattcattgctagagcgtttaccaaactcggaggtaagagaaatt
ctcttagctatcagtcctaccatggagggcgataccacagccttctaccttacccgcaaa
ctccgcgactttaacctgcgcattaccacaattgcccgtggggtgccagtgggtggtgag
ctggagtataccgatgaagttacccttggccgtagtatagtagaacgtactgcctacggt
aaaatataa
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