Pseudomonas koreensis: AYO71_08190
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Entry
AYO71_08190 CDS
T04647
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr00300
Lysine biosynthesis
pkr01100
Metabolic pathways
pkr01120
Microbial metabolism in diverse environments
pkr01230
Biosynthesis of amino acids
Module
pkr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYO71_08190
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pkr01002
]
AYO71_08190
Enzymes [BR:
pkr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AYO71_08190
Peptidases and inhibitors [BR:
pkr01002
]
Metallo peptidases
Family M20
AYO71_08190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
AMT87523
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All DBs
Position
complement(1887909..1889060)
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AA seq
383 aa
AA seq
DB search
MTAHADLSPTLQLAIDLIRRPSVTPVDADCQKQMMQRLGDAGFTLEPMRIEDVDNFWATH
GNNDGPVLCFAGHTDVVPTGPVTAWQIDPFNAVIDEHGMLCGRGAADMKGSLASMTVAAE
RFVADYPNHKGKVAFLITSDEEGPAHHGTKAVVERLVARNERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVKGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNVNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHGLDWHIDWALSGLP
FLTEPGALLDAVSSSIKDITGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctatcgccgacccttcaactggccatcgacctgatccgccgt
ccctccgtaaccccggtcgatgccgactgccagaagcagatgatgcagcgcctgggcgat
gccggtttcaccctggagccgatgcgcatcgaagatgtggataacttctgggccacccac
ggcaacaacgacggcccggtgctgtgcttcgccggccacaccgacgtggtgccgaccggt
ccggttaccgcatggcagatcgatccgttcaatgccgtgatcgacgaacatggcatgctc
tgcggccgtggcgcggcagacatgaaaggcagcctggcgtcgatgaccgtcgccgctgaa
cgctttgtcgccgattacccgaaccacaaaggcaaggtcgctttcctgatcaccagcgat
gaagaaggcccggcgcatcacggcaccaaggctgtggtcgaacgtctggtcgcgcgcaac
gagcgtctggactggtgcatcgttggcgaaccgtcgagcactacgctggtcggcgatgtg
gtgaaaaacggccgtcgcggttccctcggcgccaagctcacggtcaaaggtgtgcagggt
cacgtggcctacccgcacctggcgaagaacccgatccatctcgccgctccggcgctggca
gagctggccgccgagcactgggaccacggcaacgacttcttcccgccgaccagtttccag
atttccaacgtcaattccggcaccggcgcgaccaacgtgatcccgggtgatctggtggcg
gtgttcaacttccgtttctccaccgaatcgaccgtcgaaggcctgcagaaacgcgttgcc
gatattctcgacaagcatggtctggactggcacatcgactgggcgctgtccggcctgccg
ttcctcaccgaaccgggcgcgctgctcgatgcggtatcgtcgagcatcaaggacatcacc
ggtcgcgagaccaaggcgtcgaccagcggcggcacctccgatggccgtttcatcgcgacc
atgggcacgcaagtggttgaactgggcccggtcaacgcgaccatccatcaggtcaacgag
cgcgtgctggcggcggatctcgatgtgctgacggaaatctattaccagaccctgatcaag
ttgctcgcctga
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