Pseudomonas koreensis: AYO71_08315
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Entry
AYO71_08315 CDS
T04647
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYO71_08315 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkr03032
]
AYO71_08315 (rnhB)
Enzymes [BR:
pkr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
AYO71_08315 (rnhB)
DNA replication proteins [BR:
pkr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
AYO71_08315 (rnhB)
Elongation factors (archaeal)
AYO71_08315 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
AMT87547
LinkDB
All DBs
Position
1917464..1918090
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AA seq
208 aa
AA seq
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MQMGLDFTLVAEVEELVAGVDEVGRGPLCGAVVTAAVILDPNRPILGLDDSKKLTEAKRE
KLYDEICEKALSWCIARAEVEEIDDLNILHATMLAMQRAVAGLHIQPKLAMIDGNRCPHL
PMRAEAVIQGDGKVPAIAAASILAKVSRDREMAAFELIYPGYGIGGHKGYPTPVHLEALA
RLGPTPIHRRSFAPVRLAYEARESLTQV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgggcctggatttcaccctggtcgccgaagtcgaagagctggtcgccggtgtt
gatgaagtcggtcgtggtccgttgtgcggtgcggtggtgacggcggcagtgattctcgat
ccgaaccggccgatcctcggcctcgacgattcgaaaaaactcaccgaagccaagcgcgaa
aagctctacgacgagatctgcgaaaaggcgctgagctggtgcatcgcccgcgccgaagtc
gaagaaatcgacgatctgaatatcctccacgcaaccatgctggccatgcagcgcgcggtc
gccggtctgcatattcagccgaagctggcgatgatcgatggcaaccgctgcccgcatttg
ccgatgcgtgccgaggctgtgatccagggcgacggcaaggtaccggccatcgcggcggcg
tcgattctggccaaggtcagccgtgaccgcgaaatggcggcattcgaattgatctacccg
ggctacggcatcggtggccataaaggctatccgacgcccgttcatctggaagcgctggcg
cggctcggcccgacgccgattcaccgccgctcgttcgccccggtacgcctggcttacgag
gcgcgggaaagcctgacgcaggtttag
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