Pseudomonas koreensis: AYO71_11620
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Entry
AYO71_11620 CDS
T04647
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr00071
Fatty acid degradation
pkr00280
Valine, leucine and isoleucine degradation
pkr00310
Lysine degradation
pkr00362
Benzoate degradation
pkr00380
Tryptophan metabolism
pkr00410
beta-Alanine metabolism
pkr00640
Propanoate metabolism
pkr00650
Butanoate metabolism
pkr00907
Pinene, camphor and geraniol degradation
pkr00930
Caprolactam degradation
pkr01100
Metabolic pathways
pkr01110
Biosynthesis of secondary metabolites
pkr01120
Microbial metabolism in diverse environments
pkr01200
Carbon metabolism
pkr01212
Fatty acid metabolism
Module
pkr_M00087
beta-Oxidation
pkr_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AYO71_11620
00650 Butanoate metabolism
AYO71_11620
09103 Lipid metabolism
00071 Fatty acid degradation
AYO71_11620
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AYO71_11620
00310 Lysine degradation
AYO71_11620
00380 Tryptophan metabolism
AYO71_11620
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AYO71_11620
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AYO71_11620
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AYO71_11620
00930 Caprolactam degradation
AYO71_11620
Enzymes [BR:
pkr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AYO71_11620
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AYO71_11620
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AYO71_11620
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
UDPG_MGDP_dh_N
DUF1731
Motif
Other DBs
NCBI-ProteinID:
AMT88163
LinkDB
All DBs
Position
2608514..2610658
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AA seq
714 aa
AA seq
DB search
MSEAIRYEKGQDGIVVLTMDMPGQSANTMNAVYREAMAACVARLSAEKDSIAGVIITSAK
KTFFAGGDLNELIKVGKPEAKAFYDMVLTLKAQLRSLETLGKPVVAAINGAALGGGWEIC
LSCHHRIAVDDASVQLGLPEVTLGLLPGGGGVVRMVRMLGIEKALPYLLEGKKVRPQQAL
QAGLIDDLAADRDELLAKARAWIFDNPAPVQRWDVKGYQIPGGTPSNPKVAQMLAIAPSI
LRAKTHGTLPAPEKILCAAVEGAQVDFDTAHLIETRYFTELTTGQISKNLIGTFWFQLNE
INAGGSRPQGFAPYKTRKVGVLGAGMMGAGIAFVSASAGIDVVLKDINLAAAEKGKAHSA
ALLDKKVARGQMTAEQREAVLARIVASESDGDLAGCDLIIEAVFEDRQLKAKVSAAAQQV
VGGDAVIASNTSTLPITGLATAVPDQSKFIGLHFFSPVEKMPLVEIIKGAQTSDETLARG
FDFVLQIKKTPIVVNDSRGFFTSRVFGTFTNEGIAMLGEGVSAPMIETEARKAGMPVGPL
AISDEVSLSLMSHIRQQTAKGLQAEGKLLIEHPAFAVIDLMLNEFKRPGKAAGGGFYEYP
AGSQKHLWPELKTRFEKADGQISAKDVRDRLLFVQAIETVRCVEEGVLTSTADANVGSIF
GIGFAAWTGGALQFINQYGLEDFIARAQYLAEQYGERFTPPALLLDKAAKGEMF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagccattcgttacgaaaaaggccaggacggtatcgtcgtgctgaccatggac
atgccgggccagagcgccaacaccatgaacgccgtgtatcgcgaggccatggccgcttgc
gttgctcgtttgtcagcggagaaggacagcatcgccggagtgatcatcacctccgcgaag
aaaaccttttttgccggcggcgacctcaatgaattgatcaaggtcggcaaacccgaagcc
aaagctttctacgacatggtgctgaccctcaaggcgcaattgcgcagcctggaaaccctc
ggcaaaccggtggtcgcggcgatcaacggcgctgcgttgggcggcggctgggagatctgt
ctgtcctgccaccatcgcatcgctgtggatgatgcctcggtgcaactcggtttgccggag
gtgacgctgggcctgttgccgggcggcggcggggtggtgcgcatggtgcgcatgctcggt
atcgaaaaagccctgccgtacttgcttgaaggcaagaaggtgcgcccgcaacaggcgttg
caggccgggctgattgatgacctggcagcggatcgcgatgagctgttggccaaggcgcgc
gcctggattttcgacaatccggcgccagtgcagcgctgggacgtcaagggttatcagatt
cctggcggcacgccatcgaacccgaaagtggcgcagatgctggcgattgcgccgtcgatc
ctgcgcgcgaaaacccacggcaccctgccggcgccggagaagattctatgcgcggcggtg
gagggcgctcaggtcgatttcgatacggcgcacctgatcgaaacccgctacttcaccgag
ctgacgaccgggcagatttcgaaaaacctgatcggtacgttctggttccagttgaacgag
atcaacgccggcggttccagaccgcaaggttttgcgccctataaaacccgcaaagtcggt
gtgctcggcgccggaatgatgggcgcaggcatcgcgttcgtcagcgcctcggccggtatc
gacgtcgtcctcaaggacatcaaccttgccgctgccgagaagggcaaagcgcattccgca
gcgctgctggacaagaaagttgcccgtggccaaatgactgccgaacagcgcgaagcggtg
ctggcgcgaatcgttgcgagcgaaagcgatggcgatctggccggttgcgatctgatcatc
gaagcggtgttcgaggatcgccagctcaaagccaaggtatcggccgccgcgcaacaggtg
gtgggtggcgacgctgtcatcgcctccaacacatcgaccctgccgatcaccggcctggcg
acggcggtgcccgatcaaagcaaattcatcggcctgcatttcttcagtccggtggaaaaa
atgccgctggtggaaatcatcaagggcgcgcagaccagcgacgaaactctcgctcgcggt
ttcgacttcgttctgcaaatcaagaaaactccgatcgtggtcaatgacagtcgcggcttc
tttacctcgcgggttttcggcacattcaccaacgagggcatcgccatgctcggcgagggt
gtcagtgcgccgatgatcgagaccgaagcgcgcaaggccgggatgccggtcgggccgctg
gccatctccgacgaagtttccctcagcctgatgagccatatccgtcagcagacggccaag
ggcttgcaggcagaaggcaaactgctgattgagcacccggccttcgccgtgatcgatttg
atgctcaatgaattcaagcgaccgggcaaagctgccggaggcggtttttatgagtatcca
gcgggctcgcagaagcatttgtggccggagctgaaaacgcgcttcgagaaggccgacgga
cagatctctgcgaaggatgtgcgtgatcggctgttgtttgtgcaggccatcgaaaccgtg
cgttgcgtggaggagggcgtgctcacctcgacggcggatgccaacgtcggttcgatcttc
ggcatcggtttcgccgcgtggaccggcggtgcgctgcagttcatcaaccagtatggcctg
gaggacttcatcgcccgcgcgcagtatctggccgagcaatacggcgagcgctttaccccg
ccagcgctgctgctggacaaagcggcgaaaggtgaaatgttctag
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