Priestia koreensis: IE339_19500
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Entry
IE339_19500 CDS
T08027
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pks
Priestia koreensis
Pathway
pks03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IE339_19500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pks03400
]
IE339_19500
Enzymes [BR:
pks01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IE339_19500
DNA repair and recombination proteins [BR:
pks03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IE339_19500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
AAA_16
HHH_5
AAA_12
AAA
DEAD
nSTAND3
T2SSE
DUF4926
AAA_29
AAA_18
AAA_28
NTPase_1
TsaE
AAA_17
Motif
Other DBs
NCBI-ProteinID:
UNL84303
LinkDB
All DBs
Position
complement(3698991..3701339)
Genome browser
AA seq
782 aa
AA seq
DB search
MSDEQTTAVEERFIKGTAIVTIFHNEENLYNVARIRVKETNLTLEDKEAVVTGYFPRLHE
DEYYTFYGHFKEHPKFGLQFNVERFKKELPQSKQGVIQYLSSDLFHGIGKKTAESIVDTL
GERAIYKIMKDPNVLKKVPKLSGEKAITLVEQLREHQGLEEVMIKLTDYGFGPQLSMKIF
QAYKNEALDVIKRNPYQLVEDVQGIGFNRADELGRKLGMEGNHPDRIRAGILYVLEQECN
QIGHVYLTFEQLQQQTIALLQKNHQDGITFDDVMDEMERLKDDKKLVLADDKAYIPPLYY
AEKGVATAIKRVLEQTEYTDQFPESEFLLALGELEERLSVQYAPSQREAIQTALMSPMML
LTGGPGTGKTTVIKGIVELYAELHGCSLDPGEYKKDETFPVLLVAPTGRAAKRMSESTGL
PAVTIHRLLKWNGQEGFEHNEDQPIEGKLLIVDEMSMVDTWLAHQLMKSLPVHIQVIFVG
DEDQLPSVGPGQVLRDLLQANVIPTVRLTDIYRQEHGSSIIDLAHAIKKGELPPDIRQPQ
PDRSFIKCTTAQISEVVQKVSANAFKKGYQVKDIQVLAPMYRGPAGIDQMNVILQELFNP
PSQQRREVKHGDVVYRVGDKVLQLVNQPESHVFNGDMGEIVSVFYAKENTEKQDMLVISF
DGNEVTYTKQDFNQITHAYCCSIHKSQGSEFSIVILPVVKSYYRMLRRNLIYTAVTRSKN
FLILCGEEDALNLGIKRNDDGMRQTTLLSLLQSEDVPHDPNEVPFMADANIGMENVTPYD
FM
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaacaaacgactgcggtcgaggaacgcttcattaagggaacagccattgtc
acgatttttcataatgaagaaaacctgtacaacgttgctcgcattcgagtaaaagaaacg
aatttaacgttagaggataaggaagcggtcgtgacagggtatttccctcgccttcatgag
gacgaatattatacgttttatgggcattttaaagagcatccaaaattcggcctgcagttc
aacgtagagcgatttaagaaagagcttccgcagtcaaagcaaggcgtcattcagtattta
tcgagcgatttgtttcatggaatcggtaaaaagacggctgagagcattgtcgatacgctt
ggtgaacgagcgatttataagatcatgaaagacccaaacgtgttaaagaaagtaccgaag
ctatccggtgaaaaagcgattacgcttgtcgaacaacttcgtgagcatcaagggctagaa
gaagtcatgattaagctgacggactatggttttggtccgcagctgtcgatgaagattttc
caagcgtacaaaaacgaggcactagacgttattaagcgcaatccgtatcagcttgttgaa
gacgttcagggaattggctttaatcgtgcggatgagcttggtcgtaagctcggaatggaa
ggaaatcatccagatcgaattcgagctggaattttatacgtgctcgaacaggagtgcaat
caaattggtcacgtatacttaacgtttgaacagctacagcagcaaaccatcgcactgcta
caaaaaaatcatcaagacgggatcacctttgacgatgtgatggacgagatggagcggttg
aaagatgacaaaaagctagtgctagcggatgataaagcgtatattccacctctttactac
gctgaaaaaggtgttgcgacggccattaagcgagttcttgagcaaaccgaatataccgat
caatttccagaatcggaatttttgttggcgctcggtgagttagaagagcgtttgagcgtt
caatacgcgccttcacagcgtgaggctattcaaaccgcccttatgtctccgatgatgctg
ttaacaggaggtcctggtacggggaaaacgaccgttattaaaggaatcgtcgagctctat
gcagaactgcacggctgttcgctagatccgggtgaatacaaaaaggatgaaacgttccct
gttctcctcgtcgctccaacaggacgggcggcaaaacgaatgagcgagtccactggttta
ccggcggtcaccattcatcgccttttaaaatggaacggacaagagggattcgagcacaac
gaagatcagccgattgaaggaaagctattaattgtcgatgaaatgtcgatggtggacacg
tggcttgctcaccagctgatgaagtctctccctgtacatattcaagtcatcttcgtagga
gatgaagatcagcttccgtctgttggaccaggacaagttcttcgcgacttattgcaggcg
aatgtcattccaacggttaggctaacggatatttatcgccaagaacacggctcttccatt
attgatttggcccacgccataaaaaagggagagcttcctcctgatattagacagccacag
ccagaccgttcatttattaaatgcacgacggcgcaaattagcgaggtagtgcaaaaggtt
tctgccaatgcatttaaaaagggctatcaggtgaaggacattcaagtgcttgctccgatg
tatcgaggacctgcgggcattgatcaaatgaacgtcattctgcaagagctatttaatccg
ccttctcagcagcgcagagaagtaaagcacggagacgtcgtgtacagagtcggtgacaaa
gttctgcagctcgtcaatcagccggaaagtcacgtatttaacggtgatatgggtgagatc
gtctccgttttttatgcgaaggagaacacggagaagcaggatatgctggtcatttcgttt
gatggcaatgaggtaacctatacaaagcaagattttaatcaaattactcatgcgtactgc
tgctccattcataaatcacaggggagcgaattttccatcgtgattttgccggttgtaaaa
agttattatcgtatgctgcgtcgtaatttaatttatacggccgtgacgcgaagtaaaaac
tttttaattttgtgcggtgaagaagacgcgttgaacttaggaattaagcggaacgatgat
gggatgaggcaaacaaccctgctttctttgctgcaaagtgaggatgttcctcatgatccg
aatgaggtcccatttatggcagatgcaaatattggcatggaaaacgttacgccgtatgat
tttatgtaa
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