Paucibacter sp. KCTC 42545: AT984_01185 Help Entry AT984_01185       CDS       T04227                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism pkt  Paucibacter sp. KCTC 42545 Pathway pkt03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pkt00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     AT984_01185  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pkt03400]     AT984_01185 DNA repair and recombination proteins [BR:pkt03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      AT984_01185   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       AT984_01185 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran UvrA_inter SMC_N AAA_29 AAA_21 AAA_16 nSTAND1 AAA_23 RsgA_GTPase AAA_22 AAA_25 AAA_18 NACHT nSTAND3 Viral_helicase1 AAA_33 DUF4350 UvrA_DNA-bind T2SSE AAA_15 DnaJ_CXXCXGXG RNA12 Motif Other DBs NCBI-ProteinID:  ALT76030 UniProt:  A0A0U2LND5 LinkDB All DBs Position 269867..275527 Genome browser AA seq 1886 aa AA seqDB search MSDEEGLIRIRGARQHNLKNIDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVET FSAYARQFLDRMDRPAVDKVDGVPPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLYARAA QLFDKKTAQPVRHDTAQSIYTELMARSLAASDPRLVLTFPVELPGNTSSEQVTQWLSASG FTRVQAEREVATPTGPHKLLDVVADRFRIQGTDKQRAMEAIELCLKRGSGRFNVYVLPAE EGPEPELWRYSTGLHCPESDLRYQDPQPPLFSFNSAMGACEACRGFGRVIGVDLGLVIPD ERKTLRNGAIKTLSTPAWKDSFDDLLRYAGDAGIPRDTAWNQLSPAQHDWVINGSPNWTG NWNKQWYGIKRFFEYLESKAYKMHIRVLLSKYRSYTPCGDCGGARLKTEALLWRLGSKAL ADANLPAEQRFMPVGVDWTRAQLEALPGLALHDLMQLPLHRLRRFVDELQLPSGLLDDAL KLLLDEIRNRLKYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPS IGLHPRDMNRIVQAMHRLRDAGNTLVVVEHDPAVMLAADRLIDMGPGPGERGGQIVFDGT PESIRSADTLTGAYLGARKHVGMGLKRPVDASTPKLIIEGVREHNLRNVTVEFPLQRMVV VTGVSGSGKSTLMQDVLYPALARHFGQQTETPGQHDRLLGADWLSDAVFVDQSPIGKTAR SNPASYVGAFDEIRKLFANAPMSAERSYTAGMFSFNAGDGRCPTCGGSGFEHVEMQFLSD VYLRCPDCDGRRFRAEMLDVKLALHGRELSVADVLELTVSEAVALFKDHREVLTKLQPII DVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAEAAAKPRQALAKKGTLFLFDEPTTGLHFD DIAKLMRALRKLLGAGHSLIVIEHNLDVIRAADWLIDLGPEGGEQGGEIVCVGTPEHVKD HPSSHTAQALREYSAHMDRPALQVAEGRPLQAILRARRQIDPNIRIVNAREHNLKSVDVS IPRGKFNVITGVSGSGKSTLAFDILFNEGQRRYLESLNAYARSIVQPAGRPEVDAVWGIP PTVAIEQRLSRGGRKSTVATTTEVWHFLRLLYVKLGVQHCMHDGTPVRPQSVESIAAQLL RDHRGQHVGLLAPLVVNRKGLYTDLAKWAKTRGYTHLRVDGEFLPTAPWPRLDRFKEHTV ELPVGDLVIALDKEAELRELLAKALDLGKGVLHLLSPLDGLKAAQAAGQSTAGLGAVKVF STKRACPTCGTSYGELDPRMFSYNSKHGWCNSCVGTGLALTREQRKALDDSQPDKDNKGR EQSFAGEEVELEGLVDQACPDCCGARLNPSARAVTFEGQAISDVAAWSVGAARAWVQSLE LLGRDADIARDVLSEIKGRLEFLEEVGLGYLTLDRAAPTLSGGEAQRIRLAAQLGSNLQG VCYILDEPTIGLHPRDNQILLKALATLSDKGNTLVVVEHDEDTIRRADHIIDIGPGAGKR GGHVVAQGTAADLALVADSVTGRFLAHPLIHPLQERREMLGEAPALRILDATLHNLRHVT VDVPLHRLVAVTGVSGSGKSTLARDVLLANMAVAVPLRKAPAHWIGCAGIEGHEKVDRVL EVDQTPIGKTPRSCPATYIGFWDAIRKLFAETLESKARGYAPNRFSFNTGAGRCPGCEGQ GMRTIEMSFLPDVKVLCDQCHGQRFNPETLGVTWRGKSIGDVLAMEVDEAVEFFAAMPAI GHPLKLLQDVGLGYLTLGQPSPTLSGGEAQRIKLVSELVKVRDEVGRRGQKAPHTLYVLD EPTVGLHMADVERLIRVLHRLVAGGHSVVVIEHDLDVVAEADWVIDLGPDGGTAGGAVVV QGTPEYVVAAGTHTGMALLPVLQRGG NT seq 5661 nt NT seq  +upstreamnt  +downstreamnt atgtcagacgaagaaggtctcatccgcatccgcggcgcccgccagcacaatctgaagaac atcgacctggatttgcgcacgggggagatgaccgtcgtgaccggcccgagcggctcgggc aaatccagcctggtgttcgataccttgtacgccgagggtcagcgccgctacgtcgagacc ttctcggcctatgcgcgccagttcctggatcgcatggaccgccctgctgtcgacaaggtg gacggcgtgccgcccgccatcgccatcgatcagaccaatccggtgcgcacctcgcgctcc acggttggcaccatgaccgagctgaacgatcacctcaagctgctctacgcccgcgcggcc cagctgtttgacaaaaaaactgcccagccggtgcgccacgacacggcgcaaagcatctac accgagctgatggcgcgcagcctggccgccagcgacccgcgcctggtgctgaccttcccg gtcgagctgcccggcaacacctccagcgagcaggtcacgcaatggctttcggccagcggt ttcacccgcgtgcaggccgagcgtgaagtggccacacccaccgggccgcacaagctactg gatgtggtggccgaccgcttccgcattcaaggcaccgacaagcaacgcgcgatggaagcc atcgagctgtgcttgaagcgcggcagcggccgcttcaatgtctatgtgctgccggccgag gaagggccggagccggagctctggcgctactccaccggcctgcattgcccggaaagcgat ctgcgctaccaagacccgcagccgccgttgttctccttcaattcggcgatgggggcttgc gaggcctgccgtggctttggccgcgtcattggcgtggacctgggcctggtgattccggac gagcgcaagaccttgcgcaacggtgccatcaagaccctcagtacgcctgcctggaaagac agctttgacgacctgctgcgctacgccggcgatgccggcatcccgcgcgacacggcttgg aaccagctctcgccggcccagcacgattgggtcatcaacggctcacccaactggaccggc aactggaacaagcagtggtacggcatcaagcgcttttttgagtatctggagagcaaggcc tacaagatgcacatccgcgtgctcttgtccaaataccgcagctacacgccttgcggcgac tgcggcggtgcgcgcctcaagaccgaggccctgctgtggcgcctggggagcaaggcgctg gccgatgccaatctgccggccgagcagcgtttcatgccggtgggcgtggactggactcgt gcgcagctggaggccttgcccggcctggccctgcatgatttgatgcagctgcccctgcat cgcctgcgccgcttcgttgatgagttgcaactgcccagcggcttgttggacgatgccctc aaactcttgctggacgagatccgcaaccggctcaaatacctctgcgatgttggcatcggc tacctgacgctggaccgccaaagccgcacgctcagcggcggcgaggtgcagcgcatcaac ctgaccaccgccctgggcacctcgctggtcaacaccttgttcgtgctggacgagcccagc atcggcctgcacccgcgcgatatgaatcgcatcgtgcaagccatgcaccgcctgcgcgat gccggcaacaccttggtggtggtggaacacgacccggccgtgatgctggcggccgaccgg ctaatcgatatgggccccggccccggcgagcgcggcggccagattgtgtttgacggcacg cccgagtcgatccgctcggccgacacgctgaccggcgcctacctcggcgcgcgcaagcat gtgggcatgggcctgaagcggccggtggacgccagcacgcccaagctcatcatcgaaggc gtgcgcgaacacaatctgcgcaacgtcacggtggagttcccgctgcagcgcatggtggtg gtgacgggagtgtcgggctcgggcaagagcaccttgatgcaagacgtcttgtacccggcc ctggcgcgccacttcggccagcaaaccgagacgccgggccagcacgaccgcctgctcggt gcggactggctgtcggacgcggtgtttgtggaccagtcgcccattggcaagacggcacgc tccaacccggccagctatgtgggcgcgtttgacgagatccgcaagctgttcgccaatgcg ccgatgtcggccgagcgcagctacaccgccggcatgttcagcttcaacgccggtgatggc cgctgccccacctgcggcggctcgggcttcgagcatgtggagatgcaattcctgtcggat gtgtatctgcgctgcccggactgcgacggccgccgtttccgcgccgagatgctggatgtg aagctggccttgcatggccgcgaactgagcgtggccgatgtgctggagctgactgtcagc gaagccgtggccttgttcaaagaccatcgcgaggtgctgaccaagctgcaacccatcatc gatgtgggcctggaatatgtgaagctgggccagccggtgccaacgctgtcgggcggtgag gcgcagcgcctcaagctggccggcttcctggccgaggcggccgccaagccgcgccaggcc ctggccaagaagggcacgctcttcctgttcgacgagcccaccaccggcctgcacttcgat gacatcgccaagctgatgcgcgccctgcgcaagctgctgggtgccgggcattcgctgatc gtgatcgaacataacctcgacgtgatacgggcggcggattggctgatcgacctcggcccc gaaggcggcgagcagggcggtgagatcgtctgcgtcggcacgcccgagcatgtgaaggat caccccagctcgcacacggcccaggccttgcgtgagtattcggcgcatatggaccggccc gccttgcaagtggcggagggccggcccctgcaagccatcctgcgcgcacgccggcagatc gacccgaatatccgcatcgtcaatgcgcgtgagcacaatttgaagtcggtggatgtgagc atcccgcgtggcaagttcaatgtgatcactggcgtctcgggctcgggcaaatccaccttg gcgtttgacatcttgttcaacgagggccagcgccgttatctggagtcgctcaacgcctat gcgcgctccatcgtgcagccggccgggcggcctgaggtggatgcggtctggggcataccg cccacggtggcgattgagcagcgcctgtcgcgcggcggccgcaagagcacggtggccacc accaccgaggtctggcatttcctgcgcctgctgtatgtgaagctgggcgtgcagcactgc atgcacgacggcacgccggtgcggccgcaaagcgtggaatcgattgccgcgcagctgctg cgtgatcaccgcggccagcatgtgggcttgctggcgcccctggtggtgaaccgcaagggc ctctacaccgatctggccaaatgggccaagacgcgcggctacacccatctgcgggtcgac ggtgaattcctgcccaccgccccctggccgcgcctggaccgcttcaaagaacacacggtg gagttgccggttggcgacctggtgattgcgctggacaaggaagccgagctgcgcgagctg ctggccaaggccctggacctgggcaagggcgtgttgcatttgctgagcccgctggacggc ctcaaggccgcgcaagccgccgggcaaagcacggccggcctgggcgccgtcaaggtcttc tccaccaagcgggcctgcccgacttgcggcaccagttacggcgagctggacccgcgcatg ttcagctacaactccaagcatggctggtgcaatagctgtgtaggcaccggcctggcgctg acgcgcgagcagcgcaaggcgctggatgactctcagcccgacaaggacaacaagggccgg gagcagagctttgccggcgaagaggtcgagctggaaggcttggtggatcaggcctgcccg gactgctgcggtgcccgcctcaaccccagcgcccgcgccgttacctttgaaggccaggcc atcagcgatgtggcggcctggagcgtgggtgcggcccgcgcctgggtgcagagcctggag ctgctggggcgcgatgccgatattgcccgcgatgtgctgagtgagatcaagggccgcttg gagtttctggaagaagtcggcctgggctatttgaccctggaccgggcggcgcccaccttg tccggcggcgaggcccagcgcatccgcctggcggcgcagttaggcagcaatttgcaaggg gtttgctacatccttgacgagcccaccatcggtctgcatccgcgtgacaaccagatcctg ctcaaggccctggccacgctgagcgacaagggcaacaccctggtggtggtggaacatgac gaagacaccatccgccgcgccgatcacatcatcgacatcggccccggagccggcaagcgc ggtggccatgtggtggcccagggcacggcggccgatctggccttggtggctgattcggtc accggccgcttcctggctcatccgctgatccacccgctgcaagagcgccgcgagatgctg ggcgaggcgccggcgctgcgtattctggacgccactctgcacaatctacgccatgtcacg gtggatgtgccgctgcatcgcctggtggcggtgacgggggtgtccggttcgggcaagtcc actttggcgcgtgatgtgctgctggccaatatggcggtggccgtgccgctgcgcaaagcg ccggcccactggatcggctgcgccggcattgagggccacgagaaagtggaccgcgtgctg gaggtggatcagacccctatcggcaaaacgccgcgctcctgcccagccacctacatcggc ttctgggatgccatccgcaaactcttcgccgagaccttggagagcaaggcgcgtggctat gcgccgaatcgcttcagcttcaacaccggcgcgggccgctgcccgggctgcgaggggcag ggcatgcgcaccatcgagatgagcttcttgcccgatgtgaaggtgctgtgtgaccaatgc catggccagcgtttcaatccggaaaccctgggcgtgacctggcggggcaagagcatcggc gatgtcttggcgatggaagtggacgaggcggtggagttctttgccgccatgccggccatc ggccacccgctcaagctgctgcaggatgtgggcctgggctatttgaccctgggccagcct tcacccactttgtcgggtggcgaggcgcagcgcatcaagctggtgtccgagttggtcaag gtgcgcgacgaggtgggtcggcgcggccagaaggcgccgcacaccctctatgtgctggac gaacccacggtgggcttgcacatggccgatgtggagcgcttgattcgcgtgctgcatcgc ctggtggcgggcgggcattcggtggtggtgatcgagcacgaccttgacgtggttgccgag gccgattgggtcattgacctggggcctgacggtggcaccgccggtggcgccgtcgtggtg cagggcacgccggagtatgtggtggctgccggcacgcataccggcatggccttgctgccg gtcttgcagcggggcggctga

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