Pichia kudriavzevii: C5L36_0A05040
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Entry
C5L36_0A05040 CDS
T06133
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pkz
Pichia kudriavzevii
Pathway
pkz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C5L36_0A05040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkz03019
]
C5L36_0A05040
Messenger RNA biogenesis [BR:
pkz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
C5L36_0A05040
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
C5L36_0A05040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
ARMH3_C
Trp_repressor
DUF2748
Motif
Other DBs
NCBI-GeneID:
40381617
NCBI-ProteinID:
XP_029319384
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Position
1:1100498..1102477
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AA seq
659 aa
AA seq
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MKLLHSPREMDKVFKKIIEGLEIFDTLYERHENVTSSSQKEKLESDLKKEIKKLQRFREQ
VKNWQAGNEIKDKNSLLEHRRLVEVAMEKYKVVEKGSKTKAYSDQSLAAVDEPKVDNEAC
EFVRQALETLGQQTESIEAEIERLQPSKKGKRNVQNEEMKKELEELLASHQWHTEKLEII
LRLLQNEVLNVDEVMNISEDITYYLDENRAPDFMFDDTIYDDLDLEADQALINDIHLLHE
EPSVQPPSSSNSRNDSIPEQGPKSRSSTSNHSGSNSRSNSVQASKPPLVKQSSTSSVGIL
SSKITNVNNNHDSHENPPVIQSIGTSSNNQATVTTLKPAPVPVTGEIKWSSVVNAVKKKD
TSVTPPASKPASMAVPLPTPVNEHMSTMSGSNSVSSPAQTAEAVSIPNSTINSNALNAAS
VLEALKKQKPKEEVTTNSSTSTTTITSGANSKNNYTSVSSSAIEKATESLNGNAVTSLSA
VHASSSSPTTESVSFGFTKSQKLAAATDGFRFLPPGIQSFILSISKSKDVMTSNYNPFQT
INHTPNGTFPSGLKGNSLAEIWNKSKTSSELSSLVSTLNFETLFFGYYYGKSNEERDLTL
SALKDKGWKKHKSEVNWYLVESVISQGEGWCIGDCLVFNVDSWSTTERKNTKIEMIDFI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacttcattcacccagggagatggacaaagtgttcaaaaaaatcatcgaaggt
ttggaaatctttgacactttatatgaacgacatgagaacgtgacgagttcgtctcaaaag
gaaaagttggagagtgatttgaagaaggaaattaaaaaactacaacgatttagagagcaa
gtgaagaattggcaagccggaaatgaaatcaaggataaaaactctttacttgaacatcgt
cgtttggtcgaagtagcaatggagaaatataaagtggtggaaaagggaagcaaaaccaaa
gcttattccgaccaaagcttggcagccgtagacgagccaaaagttgacaacgaagcatgt
gaatttgtcaggcaagctttagagacccttgggcagcagacagagagtatagaggcggaa
attgaaagattacagccctctaaaaaggggaaaagaaacgtccagaatgaggagatgaag
aaagaattggaagaattattagcttctcatcagtggcatactgaaaaattagagatcatt
ttaaggttgctacagaatgaagttttgaatgttgatgaggtgatgaatatcagtgaggac
ataacctactatttggatgaaaatagagctccggatttcatgtttgatgatacgatttac
gatgatttggatcttgaagccgatcaagccttaataaatgacatccatctcttgcatgag
gagccaagcgtacaaccgccatcgtcatcaaactcacgcaacgattcgatacctgagcaa
gggccgaaatctcggtcatcgactagcaaccattctggctccaattcgaggtcaaactct
gtgcaagcttccaaacctccattggtgaaacaatcttcgacttcttccgtggggatattg
tcgagcaaaattaccaatgttaacaataaccatgactctcacgaaaaccctccagtgata
caatctattggaacttcctccaacaatcaagctacagtaacaaccctcaagccggcaccg
gtacccgttaccggcgaaattaagtggtcaagtgtggtgaatgccgtcaagaagaaggac
acatctgtgacaccacctgcaagcaaacctgcctctatggcagtgccattgcctacccct
gttaatgaacatatgtctactatgtctggatcaaatagtgtatcatctcctgcgcaaaca
gctgaagctgtttccattcctaactcgacaataaattctaatgctttgaacgcagcaagt
gtgttagaagccctaaagaagcaaaagccgaaggaggaggtaaccacaaattcaagcact
tcaactacaactataacgagtggagcaaatagtaaaaacaattatacatcagtttcttct
tctgcgatagaaaaggcaaccgaaagtttgaatgggaatgctgtcacatcgctctctgct
gtacatgcttcatcatctagcccgactacagaatcagtatcatttggattcacaaagtca
cagaaactggcggcagcaacagacggattccgatttctacccccaggtattcaatctttc
atactttcaatctccaaaagcaaagacgtgatgacttcaaattacaatccatttcaaaca
ataaatcatacaccaaatggaacattcccttccggattgaagggaaatagtttggcagag
atttggaacaaatcgaaaacaagtagtgaattatcttccctagtttcaacattaaacttt
gaaactctgttttttggttactactatggtaagtccaatgaagagagagaccttaccctt
agcgcactaaaagataagggatggaaaaaacacaagtctgaagttaactggtatttagta
gagtcagttatttctcaaggggagggctggtgtattggtgactgtcttgttttcaatgtc
gattcttggtctaccactgaacggaaaaacaccaagattgaaatgattgatttcatatag
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