Parvibaculum lavamentivorans: Plav_1454
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Entry
Plav_1454 CDS
T00580
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla00020
Citrate cycle (TCA cycle)
pla00785
Lipoic acid metabolism
pla01100
Metabolic pathways
pla01110
Biosynthesis of secondary metabolites
pla01120
Microbial metabolism in diverse environments
pla01200
Carbon metabolism
pla01210
2-Oxocarboxylic acid metabolism
Module
pla_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pla_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Plav_1454
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Plav_1454
Enzymes [BR:
pla01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Plav_1454
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
HTH_31
HTH_3
HTH_26
YdaS_toxin
HTH_11
LacI
Motif
Other DBs
NCBI-ProteinID:
ABS63074
UniProt:
A7HT41
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All DBs
Position
1582787..1586038
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AA seq
1083 aa
AA seq
DB search
MPSRQNALTGPLPLWQFSSMKLSDWLETNNLTASAFAEQLGVSVSTVTRCMNGQRRPEWP
TLDSIFKATGGAVTPNDFLSDAAALQGTAPASPKPNGSDPMSSNGSNDRFERTSFLYGGN
ALFVEQLYARYQKDPQSVDAEWRTFFESLGDAPEDVLKEARGASWQRADWPIAANGELVS
ALDGNWGATTAVEAGKVKDKIAERRPAASEEEIRAATLDSVRALMMIRAYRIRGHLDADI
DPLKLRPKSQHPELQPESYGFGPDDLDRPIFIDHVLGLETATVREMLDILRRTYCGTLAV
EFMHIGDPEEKAWIQERIEGPDKEIAFTDMGRSAILDKLIQAEGFEKFCGVKYVGTKRFG
LDGAEAMIPALEQIIKRGGALGAKEIVFGMAHRGRLNVLTNVMSKPYHAVFHEFKGGSST
PEDVDGSGDVKYHLGASSDREFDGNKVHLSLTANPSHLEIVDPVVLGKARAKQDQHHDRQ
RGSVIPLLIHGDAAFAGQGIVAECLGLSDLKGHRTGGSIHFIINNQIGFTTSPINSRSSP
YPSDVAKMVQAPIFHVNGDDPEAVVHAAKIATEFRQRFNKPVVIDMFCYRRFGHNEGDDP
SMTQPLMYEKIKDHPTTLQIYSQRLIEENLMTAAEVDERLAAFRAELESHYEAAGTFRPN
KADWLDGRWSGFSKAEGEARRGETAVEVDRLREIGRKITEVPEGFHIHKTIQRFLDNRRK
SIETGEGIDWSTAEALAFGSLVSEGIKVRLSGQDSERGTFVQRHSVLNDQQTEDRYVPLN
NISEGQAEYEVINSMLSEAAVLGFEYGYSLAEPNALVLWEAQFGDFANGAQVVIDQFISS
GERKWLRMSGLVMLLPHGYEGQGPEHSSARLERFLQMCAEDNMQVANCTTPMNYFHILRR
QMHRKFRKPLILMTPKSLLRHKRAVSRIEEFGAGSSFHRVLWDDAELLPDQKIKLLPDKD
IKRVVLCSGKVYYDLYEERERRGINDIYILRVEQLYPVPAKSLMTELARFPEAEFVWCQE
EPKNMGAWNFIEPNIEWVLNHVGTRYRRATYAGRPASAATASGLMSRHNQELNQLLSEAL
KID
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtcaaggcaaaatgcgttgacaggcccattgcctctgtggcaattttcctccatg
aaactttccgactggctcgaaacaaacaatctgacggcgagtgccttcgccgagcagctt
ggtgtttccgtgtccacggtcactcgctgcatgaacggtcagcgccggcctgaatggccc
acgctggactcgatcttcaaggcgacgggcggcgcggtgacgcccaatgattttctgtcc
gatgccgcggctcttcagggaacggcgcctgcctccccaaagccaaatggatccgatccg
atgagcagtaatggttcgaacgaccgcttcgagcggacgtcgtttctctatggcggcaac
gcgctctttgtcgagcagctctatgcccgctaccagaaagacccccaatcggtcgatgcg
gagtggcgcacctttttcgaaagcctcggcgatgcgcccgaagacgtgctgaaggaagcc
aggggcgcctcctggcagcgcgccgactggccgatcgccgccaatggcgaactggtgagc
gcgcttgacggcaactggggtgcgacgacggccgttgaggccggcaaggtcaaggacaag
atcgcggagcgccgtccggcggccagcgaagaggaaattcgcgcggcaacgctcgattcc
gtccgtgcgctgatgatgatccgcgcctatcgtattcgcggccatctcgatgccgatatc
gatccgctgaagcttcgtccgaagtcgcagcatcccgaattgcagcctgaaagctatggc
ttcgggccggacgatctcgaccggccgatcttcatcgaccatgtgctcggcctcgaaacg
gcgaccgtgcgcgagatgctcgacatcctgcgccgcacctattgcggaacgctcgccgtc
gaattcatgcatatcggcgatcccgaagaaaaggcgtggatacaggaacgcatcgaaggg
ccggacaaggaaatcgccttcacggacatgggccgttcggcgatcctcgacaagcttatc
caggcggaaggcttcgaaaagttctgcggcgtcaaatatgtcggcaccaagcgtttcggt
ctcgatggcgcggaagcgatgatcccggcgctcgaacagatcatcaagcgcggcggcgcg
ctcggcgccaaggaaatcgttttcggcatggcccatcgcggccggctcaatgtgctgacc
aacgtgatgtcgaagccctatcacgcggtttttcacgagttcaagggcggttcctcgacg
ccggaagacgtcgatggttcaggcgacgtgaagtatcacctcggcgcctcgtcggaccgt
gagttcgacggcaacaaggtgcatctctcgctcaccgccaatccgtcgcatctcgaaatc
gtcgatcccgtcgtgctcggcaaggcgcgcgcgaagcaggaccagcatcacgaccgccag
cgcggttcggtgatcccgctcctcattcacggcgatgccgccttcgcgggccagggcatc
gtcgccgagtgtctcggcctgtccgacctcaaggggcatcggacaggcggctcgatccat
ttcatcatcaacaaccagatcggcttcacgacgagcccgatcaacagccgctcgtcgccc
tatccctcggatgtggcgaagatggtgcaggcgccgatcttccatgtgaatggcgacgac
ccggaagcggttgtccatgccgccaagatcgcgaccgagttccgccagcgcttcaacaag
cctgtcgtgatcgacatgttctgttatcgccgcttcggtcataacgaaggcgacgatccg
agcatgacgcagccgctcatgtacgaaaagatcaaggatcatccgacgacgctgcagatt
tattcgcagcggctgatcgaggaaaacctgatgacggcggcggaagtcgatgagcggctt
gctgctttccgcgccgagctcgaaagtcattacgaggccgcgggcactttccgtcccaac
aaggcggactggctcgatggccgctggtccggcttcagcaaggcggaaggcgaagcgcgc
cggggcgaaacggccgtcgaggtcgacaggctgcgtgagatcggccgcaagatcaccgag
gtgccggaaggcttccacatccacaagaccatccagcgctttctggacaatcggcggaaa
tcgattgaaaccggcgaaggcatcgactggtcgacggcggaggcgctcgccttcggttcg
ctggtctccgagggcatcaaggtccgtctctcgggtcaggattccgagcgcggcaccttc
gtgcagcgccattcggtgctgaacgatcagcagaccgaagaccgttacgtgccgctcaac
aatatctccgagggccaggccgaatacgaagtcatcaactcgatgctgtcggaagccgcc
gttctcggtttcgagtatggttacagcctcgccgagccgaatgcgcttgtgctctgggaa
gcgcagttcggcgacttcgcaaacggcgcgcaggtcgtgatcgaccagttcatttcgtcg
ggcgagcggaaatggcttcgcatgtcgggcctcgtcatgctgctgccgcatggttatgag
gggcaggggccggaacattcctccgcccgcctcgagcgcttcctgcagatgtgcgcggaa
gacaacatgcaggtcgcgaactgcaccacgccgatgaactatttccacattctgcgccgg
cagatgcaccgcaagttccgcaagccgctcatcctgatgacgccgaagtcccttctgcgt
cacaagcgggcggtgtcgaggatcgaggagttcggtgccggttcgtccttccaccgtgtg
ttgtgggacgatgcggagctgctgcccgaccagaagatcaagcttttgcccgacaaggac
atcaagcgcgtcgtgctctgctcgggcaaggtctattacgatctctatgaagagcgcgag
cgccgcggcatcaacgacatctacatcctgcgcgtggagcagctttaccccgttcccgcg
aagtcgctgatgacggagctggcgcgttttcccgaagcggaattcgtctggtgccaggaa
gagccgaagaacatgggcgcctggaacttcatcgaacccaatatcgaatgggtgctcaat
catgtcggcacgcgctatcgccgcgcaacctatgccggccgtccggcatcggcggccacg
gcgtcgggcctcatgagcaggcacaatcaggaactcaaccagcttctttcggaagcgctg
aagatcgattga
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