Parvibaculum lavamentivorans: Plav_2864
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Entry
Plav_2864 CDS
T00580
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Plav_2864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pla03400
]
Plav_2864
Enzymes [BR:
pla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Plav_2864
DNA repair and recombination proteins [BR:
pla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Plav_2864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABS64471
UniProt:
A7HX38
LinkDB
All DBs
Position
complement(3069374..3070045)
Genome browser
AA seq
223 aa
AA seq
DB search
MAPSSGLSATIPEAPLDCPLCPRLVAYRQDNDRAHPDWFNAPVPSFGTGNARLLIVGLAP
GVQGANRTGRPFTGDYAGDLLYATLLEFGFARGTYDARPDDGLELVGAMITNAVRCVPPQ
NKPTPAEAKTCLRFLSARIEALPDLQAVLALGRIAHDAVLSARELKRSSAPFGHGAQHDL
GQGLRLFDSYHCSRYNTNTRRLTPDMFRSVFSDVRAYLDGKGR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttggccccctcctcaggtctgtcggcgaccatccctgaagcgccgctcgactgcccgctc
tgcccgcgtctcgttgcctatcggcaagacaatgacagggcgcacccggactggttcaac
gcgcctgtcccatccttcggcaccggcaatgctcgcctgctgattgtcggcctggcgccg
ggcgttcagggagcgaaccgtaccggccggcctttcacgggcgactatgcgggcgatctc
ctctacgccacgctgctcgaattcggcttcgcgcgcggcacctacgacgcccgccccgat
gacgggctcgagctggtcggcgcgatgattaccaatgccgtgcggtgcgtgccgccgcaa
aacaagccgacgcccgccgaggccaaaacctgtcttcggttcctgtctgcccgcattgag
gccctgccggaccttcaggccgttctggccctcggacgcatcgcccacgacgcggtgctc
tcggcgcgggagttgaaacgctcatccgcaccattcggccacggcgcgcaacacgatctc
gggcagggtttaaggcttttcgacagctatcattgctctcgatacaacacgaatacgcgg
cgtctcacaccggatatgtttcggagcgtcttcagcgatgtcagggcctatctcgacggc
aagggccgctag
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