Plantactinospora sp. BC1: C6361_03950
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Entry
C6361_03950 CDS
T05377
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
plab
Plantactinospora sp. BC1
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
plab03012
]
C6361_03950 (selB)
Translation factors [BR:
plab03012
]
Eukaryotic type
Elongation factors
C6361_03950 (selB)
Prokaryotic type
C6361_03950 (selB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AVT28787
LinkDB
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Position
complement(931679..933472)
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AA seq
597 aa
AA seq
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MQVVATAGHVDHGKSTLVRALTGMEPDRWAEERRRGMTIDLGFAWTALPSGTVLAFVDVP
GHERFVPNMLAGVGPAPAALFVVAADEGWMPQSAEHLAALDALGVRHGLLVVTRTDLADP
AVATELALAEIAATSLGQVEAVAVSAATGAGLPQLRAALDRLAARLPVPEPSGPVRLWVD
RAFTIRGSGTVLTGTLGGGVLRTGDELELTGTGRRVRIRGLQTLGTQVAEVAGVARVAVN
LRGVAREQVGRGDALLTPGRFQQTDLVDVRLAGDPVAELPAEVTLHVGSAAVTARVRPLG
VDTARLRLDRPLPLRIGDRALLRDPGRRHVAGGVRVLDVVPPRLSRRGAAARRAAVLAGL
DGRPDEAAELARRGLARRSELERMGVTVTTAPVAGEWHADPVRWRELGRRLVDEVTRWAR
AHPLGPGVPVETARRLLDLPDRALVEALVTAPLVARDGRIGSGGAAGALPEQVARAVRRV
GAELAERPFVAPEAARLAEVGLGHREIGAAVRAGALLRLAENVVLLPDAPDRAIRVLAEL
PQPFTLSTARQALGTTRRVAVPLLELLDRRGSTRRLPDDARIVLGDPAGSGLDPARS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtcgtcgccaccgccggacacgtcgaccacggcaagtccaccctggtccgggcg
ctgaccgggatggagccggaccgctgggcggaggagcggcgccggggcatgaccatcgac
ctcggcttcgcctggaccgcactgccgtccgggacggtactggccttcgtggacgtaccc
ggacacgagcggttcgtccccaacatgctcgccggggtcggcccggccccggccgcgctc
ttcgtggtcgccgccgacgagggctggatgccgcagtccgccgagcacctggccgcgctg
gacgcgctcggcgtccggcacgggctgctggtggtgacccggaccgacctggccgacccg
gccgtcgccaccgaactggcgctcgcggagatcgcggccacctcgctcggccaggtcgag
gcggtcgcggtcagcgcggccaccggggcggggctgccacagctgcgtgccgccctggac
cggctcgccgcccggctgccggtgccggagccgagcggcccggtgcggctctgggtggac
cgggcgttcaccatccggggcagcggcacggtgctgaccggcaccctcggcgggggagtg
ctgcgcaccggtgacgagctggagctgaccggcaccgggcggcgggtccggatccggggg
ctacagaccctgggtacccaggtcgccgaggtggccggggtggcccgggtcgcggtcaac
ctgcgcggggtggcccgggagcaggtcggccggggcgacgcgctgctcaccccggggcgg
ttccagcagaccgacctggtcgacgtccggctcgccggggacccggtggccgagctgccg
gcggaggtcaccctgcacgtcggttccgccgcggtgaccgcccgggtacgcccgctcggc
gtcgacaccgcccggctccggctggaccggccgctgccgctgcgcatcggtgaccgggcg
ttgctgcgggatcccggccggcggcacgtggccggcggggtgcgggtgctcgacgtcgta
ccgccgaggttgagccggcgtggtgcggcggcccgccgggcggcggtgctggccgggttg
gacggccgccccgacgaggcggcagagctggcccggcgtggcctggcccgccggtccgag
ctggagcggatgggcgtgacggtgacgaccgcgccggtggccggggagtggcacgccgac
ccggtgcgctggcgggaactcgggcggcggctggtcgacgaggtgacccggtgggcgcgg
gcacatccgctggggcccggggtgccggtcgagaccgcccgacggctgctggacctgccg
gaccgggccctggtcgaggccctggtcacggcgccgctggtggcccgggacggccggatc
ggctcgggcggggcggccggcgcgctgcccgagcaggtcgcccgggcggtacgccgggtc
ggcgcggagctggccgagcggccgttcgtggccccggaggcggcccggctggccgaggtc
gggctcgggcaccgggagatcggcgcggcggtacgcgccggtgcgctgctcaggctcgcc
gagaacgtcgtcctgctgccggacgcccccgatcgggcgatccgggtactcgccgagctg
ccgcaaccgttcaccctcagcaccgcccggcaggccctcggtacgacccggcgggtcgcg
gtgccgctgctcgaactgctggaccggcgcggaagcacccgtcggctgccggacgacgcc
cggatcgtgctcggcgacccggccggttctggtctcgacccggcccgctcgtag
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