KEGG   Poecilia latipinna (sailfin molly): 106955627
Entry
106955627         CDS       T08005                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
plai  Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:plai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plai03400]
    106955627 (mdc1)
DNA repair and recombination proteins [BR:plai03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    106955627 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 106955627
NCBI-ProteinID: XP_014901393
Ensembl: ENSPLAG00000009745
LinkDB
Position
Unknown
AA seq 2009 aa
MDATQAINDSIFESEEEESEEEIQNERRKPLAKLCILNNPHIPEKELPLFLGDNFLGRDP
NLCTLQLLAPSVSKQHAAISISVHRRRGRVHEVDMEALVWDLKSMNGTRKGRLKLTPNVR
YALTEGDSLVLGDIPCRYVSSRVDSPSSLGDIETPRQSEASARLSDWDDVDTGSKKCVSS
GTKAKRTAVTGGCLSFEKTPVQPQGSLVPESDSDSESEREGRGNRKQKAVVSDSDSHKSS
LNNSAFVSPPSKVVPESEDESSITPSSSSRNGSSRRISFSLEKTDVDLEKNKSPVFVENG
MEEGEGAAEGGTFSEESRDNVKREGGKSPTGSGESLRSPLQVSRDAVPEFNLDSDTDVEG
GEEEEAPAGKSDQRPNTVLSHMDSDTDVDEDVSDKTPRTSSSNDEATKCSPAASGIQLEG
ITVESDTDMDDDDDDDDANVTSKATLPKGEHSADSVPSVQSEDFHLDSDTDVDEEEEAGK
RGNPKMGETLSENSDKPLSPHSLHPDSDACDKEVAAAGLDILSESDTDLEEDSLPAVPAA
AADLPVSSAAAAGAPESDADTDVDEPVAPRAADEGKPADLRMESDTDVEDEEANPGEEEG
GRQTENALRQNCSTPVQVSEGEVEQMETQAFTIPTSHPPRNAVPSSLRPALMSSCSDSQE
DEDYAVAETQSFILQTRSCHKGLNPNRTSVLESSAVKPEDRSNRDDSFQLGLSDSSHLQG
EARENARADAAVDGGVNMEDTQDYEESAENDSNLEATQPYEVEHPRSLSRKETCVDLTME
ATQAYIPEPYGEGSDEDEGLNSARTESVAPSALAMAETQPMFSSAEDNEPDCSSEPVKNE
TERHVADSESVVETQPMFTSDNEESGDEELSESLKSSEAQKHPRTSSPLCLAETQPVCLS
DNEESGDDEELSAESLRPSKVETHPNTDAALPLAETQPPHVGADETEPKDSCGDHENNSE
ILLPRKRKAKQLHIDEEESQQRTDSGETQPLTPGEDDDDLMPSLRKRKAKPLQLEDETQS
LVGSQVSADGSQRSVTCEEEQSSQDFISTRKRKAKPLHIEDEQTQPLISCEDEDILPERE
TKALPLTAAGVPPAEVQAEVQAEGRDGKRDGDESVTYPRKRKEKRLHLKEEETQPVSASE
SQRRIDRTKKESKAAAAGTKETGEQTKNKDESDQQEVKVVNRQTRGRRTTRKQEQDEDKK
KSQTKEQRDGKPREDKEETERHKEKEELNNEGTSKSHLEDEMQPVTISEVSPANTLKKND
VFDASSISSSMETRLGEEEEKAQCSSRQNRQTKTENKPLPSTKGRRGKAKSEDDNNQEEV
KAANQPSRGRRSTRKQNDDERQRSDENKSHIKEEGDKEAREHVETERRNEREGKSKGKHR
LKETKSGGEVEEEKGTSVETTKMDQEHLARLEKEKQPKESQEDKNEEESPKGSARVRRAA
RRTTTAACEASSEDVLARRTRSRSNSLSSEQSVSSINSNTPENKGRGRGAKRSSEASQTD
TVRSSRRRTTTATAAEPDAEAQAVSASSKVSRGRPQGRGRKTLSQPDVVIKENEQKATEV
LQLDEKRKAEPRLAGTSRGQRRVTASCSEALVLNDEGLQSNQEKTSADLTSPLPKRNMRD
RGAKTVKTEPVEETEAPTATDGDETTNKRKAKTSEEKTEVDRVQKSTEPGGKEEQQEEIP
AGIQGRRTSRASSSQVKKNEELPPKQELKDGKKAAAGAAGKKARGRTTVVQKNKNQELQE
TQTSGSSMEPPGNEIEPEISAVTPPQKRRVSSNSSPMAKTPRSSSASPATVSRVRAGSQT
YKVLFTGVVDEDGEQVLARLGGAMARGVSDMNCLVTDKVRRTVKFLCAVAKGVPVVTTRW
LEQSGKAGSFLSPLAFVVNDPEQEKKFSFSLQESLRTASSQPLLQGYEIHVTKSVKPEPV
HMKDIITCSGATFLTKMPAAHKPRTVVISCEEDLRLCGPAVSASLPVVTAEFILTGILQQ
RVDFQTHALSPSATNPRPAEGRGRGRKKT
NT seq 6030 nt   +upstreamnt  +downstreamnt
atggatgcaactcaggcgatcaatgactcgatattcgagtcagaggaggaggaaagtgaa
gaggagatccaaaatgaaaggaggaaaccactggccaaactgtgcatcttaaataatcca
cacatccctgagaaagagttgcccctcttcctgggagataatttcctgggtcgtgaccca
aatctttgcacactacagttgttggcaccatctgtgtccaagcagcatgctgccatcagc
atctctgttcaccggagaagaggtcgtgtgcatgaagtggacatggaggccctggtttgg
gacctaaagagcatgaatgggacccgtaagggacgcctaaagctgacccctaacgtgcgc
tatgcccttactgagggcgacagcttggttttgggggacatcccatgtcggtatgtgagc
tccagggtggactccccttcttcccttggtgacattgagactccaagacaatcggaagca
agcgccagattgtcagattgggatgacgttgacacaggaagcaagaaatgtgtcagtagt
ggcacaaaggctaagaggactgccgtcacaggcggttgcctctcatttgagaaaactcca
gtgcagccacaggggagcttggtgccagaatctgattctgactcagagagtgaaagagaa
gggagaggaaacagaaaacagaaggctgttgtgtctgattcagactcccacaaatccagt
ctgaacaattctgcatttgtaagccctccgagcaaagtggttcctgaaagtgaagacgaa
agctccatcacaccgtcctcctccagcagaaatgggtcaagcagacgcatcagtttcagc
ttggagaagacggatgttgacctggagaaaaacaagtcacccgtgtttgtggaaaatggt
atggaggaaggagaaggagcagccgaaggagggacgttttcagaagaaagcagagataat
gtgaaaagggaaggcggtaaaagtcccacaggaagcggtgaatcactcaggtcgccgcta
caggtctccagagacgccgtccctgaatttaacctggacagtgacacggatgtggaggga
ggagaggaggaggaggcgcctgctgggaaaagtgatcaacgcccaaacacagtcctgtca
cacatggacagtgacacggacgttgatgaagatgtctcagataaaactccaagaacgtca
tcttcaaatgatgaagcaacaaaatgttctcctgctgcttctggcattcagcttgagggc
atcacagtggagagtgacactgacatggatgatgatgatgatgatgatgatgctaacgtc
acatccaaagctacgttacctaagggtgagcacagtgctgactccgtcccttcagtacag
tctgaagatttccacttggacagcgacacagacgtggatgaggaagaggaggctgggaaa
cgggggaatcccaaaatgggcgaaacgctcagtgaaaactctgataaacctctttctcct
cacagtctccatccagacagtgacgcctgtgataaggaggtggctgcagctggtttggat
attttgtccgaaagtgatacagacctggaggaagactcactccccgctgtccctgctgct
gcagcagacctgcctgtgtcgtctgctgcagcagcaggagctccagaatctgatgcagac
acagatgttgacgaacctgttgctccccgagctgcagacgagggcaaaccagctgacctt
aggatggaaagtgatacagacgtggaggatgaggaggcaaatcctggggaggaagaaggg
ggccgacagacagaaaatgctcttcggcagaactgttctactcctgttcaagtttcagaa
ggagaagttgagcagatggaaactcaggccttcacaatccccacttctcatccacctaga
aatgctgtaccttcctccttaagaccagcattaatgtcgtcttgctcagacagtcaggaa
gatgaagattatgctgtggctgagacccagtctttcattcttcagacaagaagttgccac
aaaggcttgaatccaaaccgaacctccgttctcgagtcctccgctgtcaaaccagaggac
cggtccaacagagatgattctttccagctgggactgtctgacagcagccacctgcagggc
gaggccagggagaacgcccgagctgacgccgcagtcgatggtggcgtaaacatggaggat
actcaggactatgaggaaagtgcagagaatgactcgaacctggaggccacgcagccctac
gaggtggagcatcccagatctttgtctagaaaagaaacctgtgttgacttgactatggaa
gcaactcaggcttatatcccagaaccgtatggtgaaggttcagatgaagatgagggactg
aactctgccaggactgagagtgtggctccatctgcacttgctatggctgaaacccagcca
atgttctcttctgcggaggataatgagccagattgttcctcagaaccggttaagaatgaa
acggagaggcacgtcgctgattctgaatcagtagtggaaacacagcccatgtttacaagc
gacaacgaggagagcggcgatgaagagttgtcagagtccctgaagtcttcagaggcgcag
aaacatccacggacttcttcacctttatgccttgctgaaacccaacccgtgtgtctgagc
gacaatgaggagagtggcgacgacgaagagttgtcagcggagtccctgcgaccttcaaaa
gtggaaacacacccaaacactgatgcggctttgccgcttgctgaaacccagcccccgcat
gtcggcgctgacgaaactgagccgaaggattcatgtggagatcatgaaaataactccgag
atccttcttccacggaaaagaaaagcaaagcagcttcatattgacgaagaggagtcgcag
cagcgcacagactctggtgaaacacagcctttgactccaggtgaggatgatgacgatttg
atgccaagcctgcggaaaaggaaagcaaagccgctgcagctggaagacgagacacaatca
ctcgttggttctcaagtctctgcagatggatctcagcgttcggttacatgcgaggaagaa
caaagcagccaagactttatctccacccgaaaaaggaaagcgaagccgctgcacattgaa
gatgagcagacccagcctctgataagttgtgaagatgaagacatcctaccagaaagggag
acgaaagctcttcctctcaccgctgctggagttcctcctgctgaagttcaggcagaagtt
caggcagaagggagggatggaaaaagggatggcgatgaatccgtcacatatccacggaaa
agaaaggaaaagcggcttcatcttaaggaagaggagacgcagccggtctcagcttctgaa
tctcagagaagaatcgacaggacgaaaaaggaaagcaaagccgctgcagctggtaccaaa
gaaacaggagaacaaaccaagaacaaggatgagagcgaccagcaggaagtgaaggtagtt
aatcgacagacaagagggagaagaactacaagaaaacaagaacaagacgaggacaaaaaa
aagagccagacaaaggagcaaagagacgggaaacctagagaagacaaggaagaaacagaa
agacacaaggagaaggaagagctgaataatgaagggacatccaagtctcatcttgaggac
gagatgcagccggttacgatttctgaagtctctccagcgaatactctgaaaaaaaacgat
gtgtttgatgcatccagcatttcgagttcaatggaaactcgattaggagaagaagaagaa
aaggcacaatgttcttcacgtcaaaatagacaaacaaagactgaaaataaaccattacca
agcaccaaaggacggagagggaaagccaaatcggaggatgacaacaatcaggaagaggtg
aaggcggctaatcaaccgtccagagggagaagaagtaccagaaaacagaatgatgatgaa
agacaaaggagcgatgaaaataagagccatataaaggaggaaggagacaaagaagcgaga
gaacatgtggaaacagagaggcgcaatgagagggaaggaaaatcaaaaggaaaacacaga
ttaaaggagacgaaatcaggaggtgaagtagaagaagaaaagggaacaagtgtggaaaca
acaaagatggaccaagaacaccttgcaagactggagaaagaaaaacagcccaaagaatca
caagaagacaagaacgaagaggagagccccaaaggttctgcaagagtgcgaagagctgca
agaagaacaaccacagcggcgtgtgaagcctcgagcgaggatgtcctggcaaggagaacc
cgatcccgctccaactccctcagctcagagcagtcggtctcctccatcaacagcaacacc
ccggagaacaaagggagaggaagaggagcgaagaggagcagcgaagcctcccagacggat
actgtgagaagcagccgccgaaggacgacgacggcgaccgcagcggagccggacgctgaa
gctcaggcggtcagtgcgagctctaaggtctccagaggaagaccacaaggaagagggagg
aagaccttgtctcagcccgatgttgtgattaaagaaaatgaacagaaagccactgaagtt
ctgcagctagatgagaaaaggaaagcagagcctaggcttgctggtaccagtagggggcag
cggcgagtcactgccagttgttctgaagctttagttttaaatgatgagggccttcagtca
aatcaggaaaagacgtctgctgatctaacatcccctctgcccaagaggaacatgagggac
aggggcgcaaaaactgtaaagaccgagcctgtggaggaaactgaggctcccacagcgact
gacggtgacgagaccacaaacaagagaaaagcaaaaactagtgaggaaaaaactgaagtg
gatagagtccaaaaatcaacagaaccaggagggaaagaggagcaacaggaagagattcct
gctgggatacagggcaggagaacaagcagagcctcaagctctcaggtgaagaagaacgaa
gagttgccccctaaacaggaattaaaagatggaaagaaggcggcggcgggagctgctggg
aagaaagccaggggtcgaacaaccgtggtccagaaaaataaaaaccaggagctgcaggaa
actcagacgtctggttcttccatggagccgcctggaaacgagattgaaccagagatctcg
gccgtgactcctccccagaagcggcgggtttcctcaaattcctcccccatggcgaagacg
ccgcgctcctcctctgcgtctccagctacggttagccgagttcgagccgggagccaaacc
tacaaggttctgttcacaggagtggtggatgaagatggagagcaggtgctggctcgtcta
ggaggcgccatggccagaggcgtctccgacatgaactgtctcgtgacagacaaagtgcga
aggacggtcaaattcctgtgcgccgtggccaaaggtgtcccagtcgtcaccactcggtgg
ctggaacagagcggtaaggctgggagcttcctttctccgcttgcttttgttgtgaacgat
ccggagcaggagaagaagttcagcttctccctgcaggagtctctgaggactgccagcagt
cagcctctcctccagggatatgagatccacgtcacgaagtcggtaaagccagaaccggtt
cacatgaaagacatcatcacctgcagcggcgctaccttcctgacaaagatgcctgcggct
cacaagcctcggaccgtggtgatctcctgcgaggaggacctgcggctgtgtggccccgcc
gtgtctgcgtctcttcctgtcgtcactgccgagtttattctcacaggaatcctgcagcag
agagtcgattttcagactcacgcactttctccctctgccaccaacccgcggcctgctgag
ggcagaggaagaggccgaaagaagacttag

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