Plantactinospora sp. BB1: C6W10_31410
Help
Entry
C6W10_31410 CDS
T05391
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
plat
Plantactinospora sp. BB1
Pathway
plat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C6W10_31410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plat03400
]
C6W10_31410
Enzymes [BR:
plat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C6W10_31410
DNA repair and recombination proteins [BR:
plat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C6W10_31410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
Helicase_RecD
HHH
UvrD-helicase
PhoH
DEAD
UvrD_C
DAP3
AAA_22
nSTAND3
PIF1
MeaB
Motif
Other DBs
NCBI-ProteinID:
AVT40207
UniProt:
A0A2R4FRP7
LinkDB
All DBs
Position
complement(7176024..7178306)
Genome browser
AA seq
760 aa
AA seq
DB search
MTGQQAPTAVRPASTAGGGPTERPAGVVLEAVLERITYANEETGYTIARFATERSGPDLL
TVVGSLLGVQPGESVRLVGRWGTHPKYGRQFEVQSYTTVLPATVQGIERYLGSGLIKGIG
PKMAERIVGHFGVDTLRVIEEEVGRLVEVPGLGPKRTKLIAAAWVEQQSIKEVMVFLQGV
GVSTSLAVRIYKKYGDGSISVVRNEPYRLAADVWGIGFKTADTIAQAVGIPHDSPQRVRA
GIQYTLSEAADAGHCYLPEPNLVADAAEILGVPVELVRDCLADLAADEGVVREAVPNPSA
EGGTIPAVYLVPFHRAESALAASLLRLLHHRDDRMPAFATVDWAKALAWLRTRTGAELAP
EQEAAVRLALTSKVAVLTGGPGCGKSFTVSSVITLAAAKGAKIVLAAPTGRAAKRMTELT
GHPAATVHRLLQLRPGGDPTHDRDNPIDADLVVVDEASMLDLILANKLVRAVAPGAHLLL
VGDVDQLPSVGAGEVLRDVLGAGSIPRVRLTKIFRQAQQSGVVVNAHRINAGQSPLLGEY
PDFFLFPVDEPEATADLVVDIVARRVPRKFGLKPRDIQVLTPMHRGPAGAGSLNTALQQA
ISPYREGQPERRHGARVFRVGDKVIQIRNNYDKGAAGVFNGTVGVVTELSVEDRKLTVRT
DEAEEIGYDFDELDELQHAYAITVHRSQGSEYPAVVIPVTMSSYTLLQRNLLYTAVTRAR
KLVVLAGSRKALAIAVRTAGTGRRHTALTHRLGGLDLAVT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggacagcaggcaccgaccgccgtacggccggcgtcgaccgccgggggcggcccc
accgagcggccggccggggtggtgctggaggcggtactggagcggatcacctacgccaac
gaggagaccggctacaccatcgcccggttcgccaccgaacgcagcggccccgacctgctg
accgtggtcggctcgctgctcggggtgcagcccggcgagagcgtacggctggtcgggcgc
tggggcacacacccgaagtacgggcggcagttcgaggtgcagtcgtacacgacggtgctg
ccagcgacggtccagggcatcgagcggtacctcggctcggggctgatcaaggggatcggc
ccgaagatggccgaacggatcgtcgggcacttcggcgtcgacaccctgcgggtgatcgag
gaggaggtcgggcggctggtcgaggtccccgggctcgggccgaagcggacgaaactcatc
gccgccgcctgggtcgagcaacagtccatcaaggaggtgatggtcttcctccagggcgtc
ggcgtctccacctcgctggccgtacgcatctacaagaagtacggcgacggctccatctcg
gtcgtccgcaacgagccgtaccggttggccgccgacgtctgggggatcggcttcaagacc
gccgacaccatcgcccaagcggtcggcatcccgcacgacagcccgcagcgggtccgggcc
ggcattcagtacaccctctccgaggccgccgacgccgggcactgctacctgcccgagccg
aacctggtcgcggacgccgccgagatcctcggggtccccgtcgaactggtccgagactgt
ctggccgacctcgccgccgacgagggtgtggtccgggaggcggtgccgaacccgagcgcc
gagggcggcaccattccggcggtctacctggtgccgttccaccgggccgagtcggcgctc
gcggcgagcctgctccggctgctgcaccaccgtgacgaccggatgccggccttcgcgacc
gtggactgggcgaaggcgctggcctggctgcgtacccggacgggtgccgaactggccccc
gagcaggaggccgcggtccggctcgccctgacctcgaaggtcgcggtgctgaccggcgga
cccggctgcggcaagtcgttcaccgtctcctcggtgatcacactcgccgccgccaagggg
gcgaagatcgtgctggccgcgccgaccggccgggccgcgaagcggatgaccgaactgacc
gggcatccggccgcgaccgtgcaccggctgctgcaactgcgccccggcggcgacccgacg
cacgaccgggacaacccgatcgacgccgacctggtggtggtggacgaggcgtcgatgctc
gacctgatcctggcgaacaagctggtcagggcggtcgcacccggcgcgcacctgctgctg
gtcggcgacgtcgaccaacttccctcggtcggggccggcgaggtgctccgggacgtgctc
ggcgccgggtcgatcccccgggtccggctgacgaagatcttccggcaggcgcagcagtcc
ggggtggtggtgaacgcgcaccggatcaacgccggtcagtccccgctgctcggcgaatat
cccgacttcttcctcttcccggtggacgagccggaggccaccgccgacctggtggtggac
atcgtcgcccgccgggtgccgcgcaagttcggcctgaagccccgggacatccaggtgctc
accccgatgcaccggggcccggccggcgccggcagcctgaacaccgcgctgcaacaggcg
atctcgccctatcgggaggggcagccggagcgccggcacggcgcccgggtcttccgggtc
ggcgacaaggtcatccagatcaggaacaactacgacaagggcgccgccggggtcttcaac
ggcaccgtcggggtggtcaccgaactgtcggtcgaggaccggaaactcaccgtccgcacc
gacgaggccgaggagatcgggtacgacttcgacgaactcgacgagctgcaacacgcgtac
gccatcacggtgcaccggtcccagggcagcgagtacccggcggtagtcatcccggtgacg
atgagttcctacacgttgttgcagcgcaacctgctctacacggcggtgacccgggcccgg
aagctggtggtactggccggctcgcgcaaggcgctggcgatcgcggtccgtaccgccggc
accggccgccggcacaccgcactcacccaccggctcggcgggctcgaccttgctgtgacg
tga
DBGET
integrated database retrieval system
